Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC010655.3-201ENST00000478818 450 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 RNU7-41P-201ENST00000515917 61 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 SNORD45.4-201ENST00000516629 73 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 RNU4-77P-201ENST00000516692 156 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 SNORD116.3-201ENST00000517176 78 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 RN7SKP295-201ENST00000517264 153 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 AC004812.1-201ENST00000540773 146 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 MIR4423-201ENST00000580922 80 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 MIR5188-201ENST00000583467 113 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 AC092447.9-201ENST00000603395 144 ntBASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.61□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNY3P1-201ENST00000365085 102 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.330-201ENST00000365230 109 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNY3-201ENST00000365484 102 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 AC117470.1-201ENST00000381974 330 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 SNORA72-201ENST00000384339 132 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNY1P4-201ENST00000384595 115 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNU6-855P-201ENST00000410395 104 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNU6-733P-201ENST00000410759 104 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 AF228730.4-201ENST00000421457 183 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 AC113410.1-201ENST00000505029 247 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 FGF7P4-201ENST00000509595 295 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.661-201ENST00000516003 99 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 SNORA18.7-201ENST00000516910 131 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 MIR3145-201ENST00000580727 82 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 DEFB117-201ENST00000602356 141 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RBM11P1-201ENST00000604951 799 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 SNORD58B-201ENST00000607313 66 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 MIR6779-201ENST00000617283 64 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 SEPT14P17-201ENST00000617978 177 ntBASIC0.6□□□□□ -2.31
KLHL28Q9NXS3 RNU6-1084P-201ENST00000362498 107 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.331-201ENST00000365267 102 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 MIR1185-1-201ENST00000408598 86 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 MTCO2P27-201ENST00000420740 428 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 AC005042.3-201ENST00000453230 174 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 SNORA74.3-201ENST00000517108 154 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 AC004817.2-201ENST00000561794 651 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 RN7SL793P-201ENST00000583259 296 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 AC131055.1-201ENST00000584626 316 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 AC010205.1-201ENST00000616668 449 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 MIR6513-201ENST00000621188 64 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 AC112487.2-201ENST00000637950 304 ntBASIC0.59□□□□□ -2.31
KLHL28Q9NXS3 MIR103A2-201ENST00000362154 78 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.315-201ENST00000365117 102 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 RNU6-937P-201ENST00000384325 106 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 MIR520C-201ENST00000385005 87 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 MIR136-201ENST00000385207 82 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 RNU4-30P-201ENST00000410245 143 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 U7.7-201ENST00000459276 60 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AC098869.1-201ENST00000481627 292 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AC022616.4-201ENST00000522985 181 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AC109810.1-201ENST00000534066 224 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AC023827.1-201ENST00000569247 97 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 POLR3GP1-201ENST00000594073 261 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 AL442644.1-201ENST00000454390 3105 ntBASIC0.58□□□□□ -2.32
KLHL28Q9NXS3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.70-201ENST00000362886 110 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 U8.7-201ENST00000364940 136 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 RNU6-131P-201ENST00000391144 107 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 RNA5SP121-201ENST00000516537 101 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 AC024405.2-202ENST00000532731 184 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 MIR4764-201ENST00000580680 88 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 AL606534.2-204ENST00000635008 178 ntBASIC0.57□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.252-201ENST00000364556 101 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.263-201ENST00000364659 114 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RNU6-130P-201ENST00000411112 103 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 AL160004.2-201ENST00000432935 350 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 SNORD123-201ENST00000459473 70 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RN7SKP164-201ENST00000516138 266 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RNU7-110P-201ENST00000516891 62 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 AC011373.1-201ENST00000607270 237 ntBASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.56□□□□□ -2.32
KLHL28Q9NXS3 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.55□□□□□ -2.32
KLHL28Q9NXS3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 435.6 ms