Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 AC134026.1-201ENST00000623249 2239 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RNU4-73P-201ENST00000363164 141 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 SNORD114-27-201ENST00000363766 70 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-442P-201ENST00000383968 104 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR1302-11-201ENST00000408051 138 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR1302-9-201ENST00000408365 138 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR1302-10-201ENST00000408734 138 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-321P-201ENST00000410912 106 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 AL603825.1-201ENST00000438481 80 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 SEPT14P8-201ENST00000508026 178 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-830P-201ENST00000516353 107 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RNU11-2P-201ENST00000516898 142 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 AC109810.1-201ENST00000534066 224 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR2681-201ENST00000581814 105 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR4795-201ENST00000584182 89 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR4653-201ENST00000585107 83 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 AL080274.1-201ENST00000605565 220 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 MIR1302-2-201ENST00000607096 138 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 SNORD113-5-201ENST00000607261 78 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 AC008133.2-201ENST00000624540 351 ntBASIC0.8□□□□□ -2.28
ZCCHC3Q9NUD5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-674P-201ENST00000363831 107 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.338-201ENST00000365320 114 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 SNORA72.4-201ENST00000384174 132 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 MT-TD-201ENST00000387419 68 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 SNORA36B-201ENST00000410438 131 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 POLR2KP2-201ENST00000438155 177 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 RNU7-141P-201ENST00000459304 62 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-437P-201ENST00000459408 95 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 AC023827.1-201ENST00000569247 97 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 MIR548AR-201ENST00000582191 57 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 AC008507.4-201ENST00000585464 127 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 AL133255.1-201ENST00000606374 441 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 MIR6857-201ENST00000613267 93 ntBASIC0.79□□□□□ -2.28
ZCCHC3Q9NUD5 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 RNU4-80P-201ENST00000363200 141 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.148-201ENST00000363557 117 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-801P-201ENST00000364087 105 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.286-201ENST00000364813 102 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 Y_RNA.395-201ENST00000383945 109 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 SNORD28B-201ENST00000390993 75 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 RNU6-1248P-201ENST00000391096 64 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 MIR1302-7-201ENST00000408841 72 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 AL392103.1-201ENST00000447000 198 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 PSMC1P5-201ENST00000512850 177 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 MIR4698-201ENST00000577795 80 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 AC007485.1-201ENST00000616755 206 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 uc_338.22-201ENST00000622722 187 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 MIR4251-201ENST00000635819 61 ntBASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
ZCCHC3Q9NUD5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1048P-201ENST00000364054 107 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-268P-201ENST00000364174 107 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.222-201ENST00000364264 102 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 MIR802-201ENST00000390235 94 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 RNU2-14P-201ENST00000411053 191 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 AC006461.1-201ENST00000412637 326 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-113P-201ENST00000516653 101 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 LARP7P1-201ENST00000605576 316 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 AC106800.4-201ENST00000614905 153 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 Pinc.1-201ENST00000616452 154 ntBASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.77□□□□□ -2.29
ZCCHC3Q9NUD5 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 MIR1278-201ENST00000408753 81 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AL035398.1-201ENST00000430869 322 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1053P-201ENST00000515930 101 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1170P-201ENST00000515974 106 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AC036111.3-201ENST00000526389 112 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 RPL23AP91-201ENST00000569211 455 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AC005357.1-201ENST00000588399 301 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 AC136443.5-201ENST00000603741 370 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.804-201ENST00000615262 101 ntBASIC0.76□□□□□ -2.29
ZCCHC3Q9NUD5 HSBP1P2-201ENST00000299671 229 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.813-201ENST00000364639 102 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 MIR146A-201ENST00000385201 99 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 MIR100-201ENST00000385259 80 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 SNORA26.5-201ENST00000391215 123 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 MTND4P19-201ENST00000446659 478 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 U7.7-201ENST00000459276 60 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1046P-201ENST00000516538 107 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 MIR6516-201ENST00000630554 81 ntBASIC0.75□□□□□ -2.29
ZCCHC3Q9NUD5 RNY1P10-201ENST00000363268 113 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.418-201ENST00000384029 102 ntBASIC0.74□□□□□ -2.29
ZCCHC3Q9NUD5 Y_RNA.424-201ENST00000384063 103 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms