Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 SNORA26.5-201ENST00000391215 123 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 MTCO2P12-201ENST00000427426 682 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 U8.19-201ENST00000459095 133 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-191P-201ENST00000516295 94 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 SNORA74.3-201ENST00000517108 154 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 AC136628.3-201ENST00000521868 290 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 JPX_2.1-201ENST00000614161 69 ntBASIC0.9□□□□□ -2.27
EXOSC3Q9NQT5 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.128-201ENST00000363391 112 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.222-201ENST00000364264 102 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.796-201ENST00000364268 102 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.799-201ENST00000364992 102 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SNORD115-46-201ENST00000390982 71 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 MIR1252-201ENST00000408861 65 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SNORA36B-201ENST00000410438 131 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-121P-201ENST00000410525 99 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.604-201ENST00000410574 102 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 NDUFA4P2-201ENST00000489989 244 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SNORD79.1-201ENST00000516069 84 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SNORD116-28-201ENST00000516123 91 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-496P-201ENST00000516145 99 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.714-201ENST00000517065 90 ntBASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.89□□□□□ -2.27
EXOSC3Q9NQT5 SNORD14E-201ENST00000364009 85 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-1187P-201ENST00000364771 110 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 MIR520C-201ENST00000385005 87 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 SNORA75.2-201ENST00000391138 150 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 SNORA75.3-201ENST00000391231 150 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 MTCO2P33-201ENST00000402100 465 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 MIR548P-201ENST00000408336 84 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC063976.4-201ENST00000421971 163 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC002429.1-201ENST00000437672 148 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 HMGN2P32-201ENST00000444648 269 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-437P-201ENST00000459408 95 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC098869.1-201ENST00000481627 292 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 RPS26P48-201ENST00000491713 339 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 RNU7-41P-201ENST00000515917 61 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-764P-201ENST00000516396 105 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.711-201ENST00000516993 102 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC005357.1-201ENST00000588399 301 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AL391903.3-201ENST00000612158 163 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC091895.1-201ENST00000624494 256 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC134503.1-201ENST00000633048 54 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 AC008163.1-202ENST00000636004 2889 ntBASIC0.88□□□□□ -2.27
EXOSC3Q9NQT5 SNORA25.3-201ENST00000363205 127 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 RNU1-124P-201ENST00000363861 145 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-969P-201ENST00000383900 105 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 SNORA80D-201ENST00000384488 135 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.527-201ENST00000384573 102 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.569-201ENST00000384749 103 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 AC245047.8-201ENST00000456455 284 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 SNORD124-201ENST00000459577 104 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 COX6CP14-201ENST00000469580 174 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 MRPS35P2-201ENST00000508242 191 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.721-201ENST00000517207 102 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 RPL23AP91-201ENST00000569211 455 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 PRELID3BP2-201ENST00000605362 201 ntBASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
EXOSC3Q9NQT5 RNU4-90P-201ENST00000362773 141 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-806P-201ENST00000365147 105 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 MIR215-201ENST00000384858 110 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 MIR802-201ENST00000390235 94 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-763P-201ENST00000390865 106 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-1248P-201ENST00000391096 64 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 ELOCP20-201ENST00000422460 345 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 MTCO1P5-201ENST00000433573 344 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 SNORD123-201ENST00000459473 70 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 AC108729.3-201ENST00000513484 108 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 SNORA40.15-201ENST00000516884 107 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 AC131281.1-201ENST00000522984 164 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 MIR4764-201ENST00000580680 88 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 MIR3171-201ENST00000584270 74 ntBASIC0.86□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.26-201ENST00000362539 101 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-797P-201ENST00000363101 109 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.214-201ENST00000364201 112 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 SNORA70.7-201ENST00000384159 133 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 MIR532-201ENST00000385025 91 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.581-201ENST00000391017 97 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 RNU6-321P-201ENST00000410912 106 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 RPS23P4-201ENST00000487908 423 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 TRMT112P2-201ENST00000512910 132 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 RNY3P15-201ENST00000516297 97 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 AC020661.2-201ENST00000560114 134 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 HSPE1P19-201ENST00000603327 295 ntBASIC0.85□□□□□ -2.27
EXOSC3Q9NQT5 MIR103A2-201ENST00000362154 78 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.19-201ENST00000362462 99 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 RNA5SP264-201ENST00000363115 107 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.136-201ENST00000363444 102 ntBASIC0.84□□□□□ -2.27
EXOSC3Q9NQT5 Y_RNA.158-201ENST00000363651 101 ntBASIC0.84□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms