Protein–RNA interactions for Protein: Q9NQ69

LHX9, LIM/homeobox protein Lhx9, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9Q9NQ69 MIR516B2-201ENST00000385190 85 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 RNU6-823P-201ENST00000391042 103 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 RNU6-710P-201ENST00000410424 105 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.604-201ENST00000410574 102 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AL390729.2-201ENST00000416137 156 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 RNU6-475P-201ENST00000516073 104 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.715-201ENST00000517082 110 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AC024405.2-202ENST00000532731 184 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 POLR3GP1-201ENST00000594073 261 ntBASIC0.82□□□□□ -2.28
LHX9Q9NQ69 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
LHX9Q9NQ69 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.105-201ENST00000363182 111 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 SNORD113-8-201ENST00000363497 74 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.368-201ENST00000365547 113 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 SNORA22B-201ENST00000383876 138 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.389-201ENST00000383924 113 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 MIR1298-201ENST00000408783 112 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 RNU2-14P-201ENST00000411053 191 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
LHX9Q9NQ69 POLR2KP2-201ENST00000438155 177 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.631-201ENST00000459607 101 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 RNU6-897P-201ENST00000517135 105 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 MIR4300-201ENST00000581016 96 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 MIR376A1-201ENST00000616574 68 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 PVT1_3.1-201ENST00000620853 95 ntBASIC0.81□□□□□ -2.28
LHX9Q9NQ69 AC134026.1-201ENST00000623249 2239 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 RNU6-1084P-201ENST00000362498 107 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 U8.5-201ENST00000364528 136 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 SNORD50B-201ENST00000364995 70 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.456-201ENST00000384232 111 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 MIR1278-201ENST00000408753 81 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 MTCO2P12-201ENST00000427426 682 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 SNRPGP10-201ENST00000432323 225 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 HMGN1P10-201ENST00000474557 553 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 RPL23AP54-201ENST00000495129 419 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 SEPT14P8-201ENST00000508026 178 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 SNORD45.4-201ENST00000516629 73 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.713-201ENST00000517013 96 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 AC022616.4-201ENST00000522985 181 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 MIR4762-201ENST00000585261 75 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 AL022345.2-201ENST00000606307 135 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 AL096861.1-201ENST00000610899 123 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 AC027279.3-201ENST00000625055 122 ntBASIC0.8□□□□□ -2.28
LHX9Q9NQ69 AL391516.1-201ENST00000554380 2449 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.336-201ENST00000365307 109 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.363-201ENST00000365529 113 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6-1323P-201ENST00000384025 107 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.418-201ENST00000384029 102 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 SNORA25-201ENST00000384384 134 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.527-201ENST00000384573 102 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6ATAC19P-201ENST00000408096 110 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6-101P-201ENST00000410323 104 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 AC024067.1-201ENST00000426199 223 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 AC004941.2-201ENST00000427009 228 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 UBL5P1-201ENST00000507979 193 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU7-40P-201ENST00000516397 64 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU7-115P-201ENST00000516433 55 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 RNU6-988P-201ENST00000519081 107 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 AP003357.1-201ENST00000604497 148 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 SNORD113-5-201ENST00000607261 78 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.128-201ENST00000363391 112 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6-801P-201ENST00000364087 105 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.203-201ENST00000364106 102 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6-342P-201ENST00000384521 104 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6-131P-201ENST00000391144 107 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 MIR548P-201ENST00000408336 84 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 MIR1252-201ENST00000408861 65 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6-121P-201ENST00000410525 99 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 HSPE1P25-201ENST00000455484 251 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 snoU13.25-201ENST00000458945 104 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU7-141P-201ENST00000459304 62 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 AC098869.1-201ENST00000481627 292 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNA5SP436-201ENST00000516020 115 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 SNORD111.1-201ENST00000516421 86 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 RNA5SP480-201ENST00000516840 109 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.711-201ENST00000516993 102 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 SNORA70.22-201ENST00000517160 124 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 AC090142.3-201ENST00000519012 385 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 MIR3171-201ENST00000584270 74 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 BX284668.6-201ENST00000606899 438 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 MIR548AY-201ENST00000617669 107 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 AC134503.1-201ENST00000633048 54 ntBASIC0.78□□□□□ -2.28
LHX9Q9NQ69 Y_RNA.26-201ENST00000362539 101 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 RNU6-797P-201ENST00000363101 109 ntBASIC0.77□□□□□ -2.29
LHX9Q9NQ69 Y_RNA.183-201ENST00000363882 113 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms