Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 snoU13.23-201ENST00000458863 104 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNU6-970P-201ENST00000516312 107 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RPL23AP91-201ENST00000569211 455 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 MIR3671-201ENST00000580455 88 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 AC103810.8-201ENST00000607347 118 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.802-201ENST00000614892 130 ntBASIC1.62□□□□□ -2.15
PCDH9Q9HC56 RNU6-1209P-201ENST00000363655 107 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.262-201ENST00000364641 102 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.515-201ENST00000384535 112 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 SNORA8.3-201ENST00000384679 139 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 MIR320A-201ENST00000385302 82 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
PCDH9Q9HC56 RNU6-360P-201ENST00000390944 104 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 SNORD58.1-201ENST00000391313 66 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 RNU6-493P-201ENST00000391321 108 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 MIR1298-201ENST00000408783 112 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.626-201ENST00000411288 95 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 SNRPGP10-201ENST00000432323 225 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.61□□□□□ -2.15
PCDH9Q9HC56 SNORD13-201ENST00000459299 104 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 HMGN1P7-201ENST00000491722 313 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 AC108210.2-201ENST00000503681 201 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 AL358944.1-201ENST00000528537 144 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.61□□□□□ -2.15
PCDH9Q9HC56 MIR3198-2-201ENST00000577868 80 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 AC011921.3-201ENST00000605540 361 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 SNORA28-201ENST00000606769 126 ntBASIC1.61□□□□□ -2.15
PCDH9Q9HC56 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
PCDH9Q9HC56 RNU6-414P-201ENST00000363705 104 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.200-201ENST00000364018 102 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.304-201ENST00000365011 112 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 RNU6-997P-201ENST00000384725 107 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 RNA5SP482-201ENST00000391269 118 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.6□□□□□ -2.15
PCDH9Q9HC56 RNU6-1116P-201ENST00000517269 99 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 AC021506.2-201ENST00000612354 169 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 AC141273.2-201ENST00000618989 130 ntBASIC1.6□□□□□ -2.15
PCDH9Q9HC56 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDH9Q9HC56 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.59□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.83-201ENST00000363005 113 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 RNU6-674P-201ENST00000363831 107 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.796-201ENST00000364268 102 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 Y_RNA.799-201ENST00000364992 102 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 MIR626-201ENST00000385032 94 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 CALM2P4-201ENST00000430810 426 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.59□□□□□ -2.15
PCDH9Q9HC56 RNU1-98P-201ENST00000458992 160 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AC099513.1-201ENST00000490423 301 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 OR9P1P-201ENST00000496431 281 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 RNU6-237P-201ENST00000515985 71 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 RNU7-28P-201ENST00000516759 62 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AC015712.3-201ENST00000559380 164 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AC130289.1-201ENST00000577321 73 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 MIR2681-201ENST00000581814 105 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 MIR4769-201ENST00000584126 77 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 BX248123.2-201ENST00000606318 124 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AC095038.3-201ENST00000634439 195 ntBASIC1.59□□□□□ -2.15
PCDH9Q9HC56 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNU6-1084P-201ENST00000362498 107 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNU1-17P-201ENST00000363022 152 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNU6-653P-201ENST00000363074 106 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.257-201ENST00000364596 102 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNU6-1318P-201ENST00000365389 103 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNU6-203P-201ENST00000384038 104 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.58□□□□□ -2.16
PCDH9Q9HC56 PIGPP3-201ENST00000425307 415 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 AC245047.8-201ENST00000456455 284 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 RNA5SP168-201ENST00000516642 112 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 SNORA44.1-201ENST00000517031 108 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 AC100767.1-201ENST00000528178 123 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 AL049861.1-201ENST00000603130 150 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 AC009779.6-201ENST00000603972 165 ntBASIC1.58□□□□□ -2.16
PCDH9Q9HC56 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 RNY1-201ENST00000364228 113 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 MT-TT-201ENST00000387460 66 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 MIR526A2-201ENST00000390198 65 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 RNU6-131P-201ENST00000391144 107 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.587-201ENST00000391210 103 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 U8.16-201ENST00000391279 133 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 RNU7-12P-201ENST00000516030 62 ntBASIC1.57□□□□□ -2.16
PCDH9Q9HC56 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PCDH9Q9HC56 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.56□□□□□ -2.16
PCDH9Q9HC56 snoU2_19.4-201ENST00000364329 80 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.229-201ENST00000364347 113 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.274-201ENST00000364714 101 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 Y_RNA.297-201ENST00000364950 91 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 RNU6-163P-201ENST00000384396 106 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 MIR522-201ENST00000385071 87 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 MTND5P15-201ENST00000434246 349 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 AC093850.1-201ENST00000454121 251 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 AC023449.1-201ENST00000454464 154 ntBASIC1.56□□□□□ -2.16
PCDH9Q9HC56 RNU6-453P-201ENST00000516819 85 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms