Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 MIR8065-201ENST00000620577 100 ntBASIC1.04□□□□□ -2.24
ELL3Q9HB65 AL391987.6-201ENST00000305671 199 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 Y_RNA.336-201ENST00000365307 109 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 AC117470.1-201ENST00000381974 330 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-969P-201ENST00000383900 105 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-1227P-201ENST00000383981 107 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 Y_RNA.569-201ENST00000384749 103 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 MIR618-201ENST00000385287 98 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 MTCO2P33-201ENST00000402100 465 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 AL451046.2-201ENST00000403074 277 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-985P-201ENST00000410182 104 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-1054P-201ENST00000411293 104 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.03□□□□□ -2.24
ELL3Q9HB65 Y_RNA.638-201ENST00000459374 113 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RPS26P48-201ENST00000491713 339 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 SNORA31.2-201ENST00000516019 134 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU7-116P-201ENST00000516940 62 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 AC044792.1-201ENST00000593294 196 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
ELL3Q9HB65 AL442644.1-201ENST00000454390 3105 ntBASIC1.03□□□□□ -2.24
ELL3Q9HB65 RNU6-1084P-201ENST00000362498 107 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 RNU4-90P-201ENST00000362773 141 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 Y_RNA.202-201ENST00000364083 110 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 MIR1285-1-201ENST00000408593 84 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 AC005534.2-201ENST00000431047 433 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 SNRPGP14-201ENST00000435400 219 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.02□□□□□ -2.25
ELL3Q9HB65 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 AC005357.1-201ENST00000588399 301 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 AL355297.3-201ENST00000604082 446 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 snoU13.31-201ENST00000607291 104 ntBASIC1.02□□□□□ -2.25
ELL3Q9HB65 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.02□□□□□ -2.25
ELL3Q9HB65 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.02□□□□□ -2.25
ELL3Q9HB65 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.01□□□□□ -2.25
ELL3Q9HB65 Y_RNA.512-201ENST00000384518 102 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 RNU6-131P-201ENST00000391144 107 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 AC024067.1-201ENST00000426199 223 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 SNORA40.15-201ENST00000516884 107 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 AP003733.2-201ENST00000529409 171 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.01□□□□□ -2.25
ELL3Q9HB65 AL022345.2-201ENST00000606307 135 ntBASIC1.01□□□□□ -2.25
ELL3Q9HB65 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1□□□□□ -2.25
ELL3Q9HB65 Y_RNA.84-201ENST00000363011 104 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 SNORA25.8-201ENST00000364831 128 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 Y_RNA.338-201ENST00000365320 114 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 RNU6-662P-201ENST00000384253 104 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 SNORA25-201ENST00000384384 134 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 RNU6-910P-201ENST00000390844 107 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 SNORD72-201ENST00000390994 80 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 AL603910.2-201ENST00000407268 136 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 RNU6-383P-201ENST00000410864 94 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 AC245047.7-201ENST00000440265 293 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 RNU6-437P-201ENST00000459408 95 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1□□□□□ -2.25
ELL3Q9HB65 AC136443.5-201ENST00000603741 370 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
ELL3Q9HB65 RNU6-674P-201ENST00000363831 107 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 Y_RNA.276-201ENST00000364732 109 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 RNU6-290P-201ENST00000365212 101 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 AL591704.2-201ENST00000421658 181 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 SNORD11-201ENST00000459124 84 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 AC108729.3-201ENST00000513484 108 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 RNU7-41P-201ENST00000515917 61 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 RNU6-322P-201ENST00000516010 103 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 SNORA18.7-201ENST00000516910 131 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 RNA5SP404-201ENST00000517118 132 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 AP003072.1-201ENST00000531740 145 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 RPL23AP91-201ENST00000569211 455 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 PRELID3BP2-201ENST00000605362 201 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 MIR6078-201ENST00000611069 100 ntBASIC0.99□□□□□ -2.25
ELL3Q9HB65 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
ELL3Q9HB65 snoU2-30.1-201ENST00000365012 70 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 Y_RNA.327-201ENST00000365201 102 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 MIR452-201ENST00000385020 85 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 MTATP8P1-201ENST00000467115 207 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 OR2A41P-201ENST00000473586 105 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 AC091959.1-201ENST00000495857 238 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 SNORA74.3-201ENST00000517108 154 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 BX284668.6-201ENST00000606899 438 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 AC022140.2-201ENST00000623500 188 ntBASIC0.98□□□□□ -2.25
ELL3Q9HB65 Y_RNA.217-201ENST00000364214 105 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 Y_RNA.326-201ENST00000365176 113 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 SNORD28B-201ENST00000390993 75 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 MRPL35P3-201ENST00000421557 364 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC0.97□□□□□ -2.25
ELL3Q9HB65 Y_RNA.641-201ENST00000459414 105 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 RNU2-31P-201ENST00000516954 155 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 RNU6-570P-201ENST00000517051 105 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 AP003716.2-201ENST00000528260 108 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
ELL3Q9HB65 AC008507.4-201ENST00000585464 127 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 AL008718.3-201ENST00000610217 321 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 AL391903.3-201ENST00000612158 163 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 snoU18.1-201ENST00000629629 71 ntBASIC0.97□□□□□ -2.25
ELL3Q9HB65 Y_RNA.11-201ENST00000362375 109 ntBASIC0.96□□□□□ -2.26
ELL3Q9HB65 RNU6-1272P-201ENST00000362776 107 ntBASIC0.96□□□□□ -2.26
ELL3Q9HB65 RNU6-899P-201ENST00000363947 107 ntBASIC0.96□□□□□ -2.26
ELL3Q9HB65 RNU6-268P-201ENST00000364174 107 ntBASIC0.96□□□□□ -2.26
ELL3Q9HB65 RNU4-10P-201ENST00000364383 140 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 141.7 ms