Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 RNU7-152P-201ENST00000458982 64 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 U8.19-201ENST00000459095 133 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 AC091951.2-201ENST00000500762 203 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 AP003716.2-201ENST00000528260 108 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 MIR4764-201ENST00000580680 88 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 MIR4423-201ENST00000580922 80 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 AL590095.2-201ENST00000604136 117 ntBASIC0.8□□□□□ -2.28
RPAP3Q9H6T3 AL442644.1-201ENST00000454390 3105 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 SNORD81.1-201ENST00000363064 77 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 SNORA72.1-201ENST00000363485 129 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.205-201ENST00000364128 113 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.303-201ENST00000364998 94 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 SNORD14.1-201ENST00000365609 90 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 MIR1185-1-201ENST00000408598 86 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 HMGN2P32-201ENST00000444648 269 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 POLR3GP1-201ENST00000594073 261 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 AC092447.9-201ENST00000603395 144 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 AC010205.1-201ENST00000616668 449 ntBASIC0.79□□□□□ -2.28
RPAP3Q9H6T3 RNU6-1115P-201ENST00000362490 106 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.58-201ENST00000362807 102 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.154-201ENST00000363624 102 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.187-201ENST00000363918 113 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.310-201ENST00000365063 113 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNY3P1-201ENST00000365085 102 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNY3-201ENST00000365484 102 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNU6-1323P-201ENST00000384025 107 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNU4-30P-201ENST00000410245 143 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 SNORD123-201ENST00000459473 70 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 RNU6-507P-201ENST00000516045 100 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 AC093027.1-201ENST00000546698 429 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 AC091925.1-201ENST00000623204 462 ntBASIC0.78□□□□□ -2.28
RPAP3Q9H6T3 Y_RNA.813-201ENST00000364639 102 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 U8.7-201ENST00000364940 136 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.462-201ENST00000384268 102 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.529-201ENST00000384586 119 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 MIR570-201ENST00000384917 97 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 MIR15B-201ENST00000385045 98 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 AC010655.3-201ENST00000478818 450 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 RNA5SP255-201ENST00000516370 107 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 RNU7-43P-201ENST00000516554 64 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 RNU7-110P-201ENST00000516891 62 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 RNU7-116P-201ENST00000516940 62 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 AC024405.2-202ENST00000532731 184 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 MIR5188-201ENST00000583467 113 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.772-201ENST00000606692 102 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 SEPT14P17-201ENST00000617978 177 ntBASIC0.77□□□□□ -2.29
RPAP3Q9H6T3 RNU6-1048P-201ENST00000364054 107 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.356-201ENST00000365475 113 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.456-201ENST00000384232 111 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.458-201ENST00000384240 102 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 RNU6-937P-201ENST00000384325 106 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 SNORD28B-201ENST00000390993 75 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 MIR936-201ENST00000401264 98 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 MIR1278-201ENST00000408753 81 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AF228730.4-201ENST00000421457 183 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 RPL23AP54-201ENST00000495129 419 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 FGF7P4-201ENST00000509595 295 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AC131055.1-201ENST00000584626 316 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AL512605.2-201ENST00000592972 256 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AC011373.1-201ENST00000607270 237 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 AC106800.4-201ENST00000614905 153 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.76□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.70-201ENST00000362886 110 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.143-201ENST00000363520 106 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 RNA5SP325-201ENST00000363756 130 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.203-201ENST00000364106 102 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 SNORD89-201ENST00000390981 114 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 AL035398.1-201ENST00000430869 322 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 FABP5P4-201ENST00000437203 171 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 SNORD19B-201ENST00000459623 84 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 RN7SKP164-201ENST00000516138 266 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 RNU4-77P-201ENST00000516692 156 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 AC109810.1-201ENST00000534066 224 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 AP003357.1-201ENST00000604497 148 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 SNORD58B-201ENST00000607313 66 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 RNU6-94P-201ENST00000607728 107 ntBASIC0.75□□□□□ -2.29
RPAP3Q9H6T3 RNU6-733P-201ENST00000410759 104 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 RNU6-875P-201ENST00000516488 106 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 MIR548AR-201ENST00000582191 57 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 AC012433.1-201ENST00000588916 398 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 RPS29P30-201ENST00000600975 111 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 AL121655.1-201ENST00000605811 308 ntBASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.74□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.5-201ENST00000362334 102 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 Y_RNA.39-201ENST00000362620 98 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 RNU6-1209P-201ENST00000363655 107 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 RNA5SP48-201ENST00000363969 126 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 SNORD14E-201ENST00000364009 85 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 RNU6-654P-201ENST00000364373 107 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 RNA5SP95-201ENST00000410319 137 ntBASIC0.73□□□□□ -2.29
RPAP3Q9H6T3 RPS26P5-201ENST00000418544 335 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms