Protein–RNA interactions for Protein: Q9H161

ALX4, Homeobox protein aristaless-like 4, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4Q9H161 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.05□□□□□ -2.4
ALX4Q9H161 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 MTND1P7-201ENST00000632801 297 ntBASIC0.05□□□□□ -2.4
ALX4Q9H161 RNU6-324P-201ENST00000363957 106 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 SNORA1.2-201ENST00000365189 134 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 MIR802-201ENST00000390235 94 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 RNU6-205P-201ENST00000390858 107 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.04□□□□□ -2.4
ALX4Q9H161 MTCO2P33-201ENST00000402100 465 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.04□□□□□ -2.4
ALX4Q9H161 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.04□□□□□ -2.4
ALX4Q9H161 TRBVB-201ENST00000477100 408 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 Y_RNA.682-201ENST00000516457 100 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 RNA5SP395-201ENST00000516567 118 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 Y_RNA.708-201ENST00000516950 96 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 MIR4676-201ENST00000583078 72 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 MIR4264-201ENST00000583520 66 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 AC005899.2-201ENST00000584353 90 ntBASIC0.04□□□□□ -2.4
ALX4Q9H161 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.03□□□□□ -2.4
ALX4Q9H161 RNY4P14-201ENST00000363656 96 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RNU6-1323P-201ENST00000384025 107 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR181A1-201ENST00000385026 110 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR329-2-201ENST00000385029 84 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 SNRPGP14-201ENST00000435400 219 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 AC098826.2-201ENST00000452011 651 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RNU7-56P-201ENST00000458744 62 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR2053-201ENST00000459295 91 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RPL17P19-201ENST00000489069 552 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.03□□□□□ -2.4
ALX4Q9H161 AC093534.1-201ENST00000504977 132 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 SCARNA8-201ENST00000515924 131 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RNU6-436P-201ENST00000516171 114 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RNU7-116P-201ENST00000516940 62 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 AC005176.2-201ENST00000596933 147 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 RAC1P9-201ENST00000604990 392 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR4791-201ENST00000607666 84 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR1244-1-201ENST00000612829 85 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 uc_338.4-201ENST00000616635 176 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 AC092794.2-201ENST00000620933 563 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 uc_338.16-201ENST00000621804 95 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR1244-3-201ENST00000635744 85 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR1244-2-201ENST00000636449 85 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR4315-1-201ENST00000636800 73 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR1244-4-202ENST00000636813 85 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 MIR4315-2-201ENST00000640925 73 ntBASIC0.03□□□□□ -2.4
ALX4Q9H161 Y_RNA.9-201ENST00000362354 101 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 SNORD116-1-201ENST00000384335 95 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 RNU6-1199P-201ENST00000411249 104 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 MTND4P28-201ENST00000426217 387 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 AC015818.7-201ENST00000428754 109 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 AC087499.7-201ENST00000441958 109 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.02□□□□□ -2.41
ALX4Q9H161 MTND1P29-201ENST00000448112 647 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 FCF1P4-201ENST00000448326 183 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 RNU6-863P-201ENST00000515989 104 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 RNU4-49P-201ENST00000516080 140 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 RNU6-155P-201ENST00000516347 100 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 RNU6-307P-201ENST00000516743 106 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 AC020891.4-201ENST00000605745 93 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 JPX_2.1-201ENST00000614161 69 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 AC015540.1-201ENST00000615828 501 ntBASIC0.02□□□□□ -2.41
ALX4Q9H161 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.01□□□□□ -2.41
ALX4Q9H161 Y_RNA.203-201ENST00000364106 102 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 RNU6-268P-201ENST00000364174 107 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 RNU6-926P-201ENST00000384075 107 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 Y_RNA.446-201ENST00000384178 104 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 SNORD100-201ENST00000408573 76 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 RNU6-710P-201ENST00000410424 105 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 RNU6-847P-201ENST00000411115 108 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.01□□□□□ -2.41
ALX4Q9H161 RNA5SP94-201ENST00000516917 108 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 RNU7-181P-201ENST00000517234 74 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 AC069113.3-201ENST00000521019 150 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 MIR4305-201ENST00000583252 102 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 AC060780.3-201ENST00000589464 80 ntBASIC0.01□□□□□ -2.41
ALX4Q9H161 Y_RNA.89-201ENST00000363031 102 ntBASIC0□□□□□ -2.41
ALX4Q9H161 SNORD118-201ENST00000363593 134 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RNU6-767P-201ENST00000384132 107 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RNU6-125P-201ENST00000384505 107 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RNU6-35P-201ENST00000384530 107 ntBASIC0□□□□□ -2.41
ALX4Q9H161 Y_RNA.573-201ENST00000384763 105 ntBASIC0□□□□□ -2.41
ALX4Q9H161 MIR938-201ENST00000401216 83 ntBASIC0□□□□□ -2.41
ALX4Q9H161 MIR548K-201ENST00000408406 116 ntBASIC0□□□□□ -2.41
ALX4Q9H161 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0□□□□□ -2.41
ALX4Q9H161 AC073261.1-201ENST00000429409 121 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RPS3AP52-201ENST00000435639 297 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RPL7P42-201ENST00000481005 679 ntBASIC0□□□□□ -2.41
ALX4Q9H161 RNU2-13P-201ENST00000515909 113 ntBASIC0□□□□□ -2.41
ALX4Q9H161 AC245505.1-201ENST00000556398 224 ntBASIC0□□□□□ -2.41
ALX4Q9H161 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0□□□□□ -2.41
ALX4Q9H161 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
ALX4Q9H161 POLR3GP1-201ENST00000594073 261 ntBASIC0□□□□□ -2.41
ALX4Q9H161 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0□□□□□ -2.41
ALX4Q9H161 MIR371B-201ENST00000638082 66 ntBASIC0□□□□□ -2.41
ALX4Q9H161 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
ALX4Q9H161 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0□□□□□ -2.41
ALX4Q9H161 RNU6-626P-201ENST00000363354 107 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms