Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 Y_RNA.771-201ENST00000598668 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 U4.1-201ENST00000620349 87 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 Y_RNA.789-201ENST00000622480 102 ntBASIC1.22□□□□□ -2.21
CCDC28BQ9BUN5 SNORD68-201ENST00000363214 84 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-833P-201ENST00000363486 107 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 SNORD1A-201ENST00000364968 72 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-196P-201ENST00000384315 107 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1289P-201ENST00000384431 106 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.562-201ENST00000384695 113 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 MIR548H3-201ENST00000408771 118 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 SNRPGP10-201ENST00000432323 225 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 RPS29P28-201ENST00000446439 141 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 SNORD127-201ENST00000458892 86 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 SNORD13-201ENST00000459299 104 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.668-201ENST00000516233 93 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 AC120024.3-201ENST00000603167 156 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 MIR6715A-201ENST00000615929 79 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 snoU18.1-201ENST00000629629 71 ntBASIC1.21□□□□□ -2.22
CCDC28BQ9BUN5 AC134026.1-201ENST00000623249 2239 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-463P-201ENST00000384340 107 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-131P-201ENST00000391144 107 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 MIR891A-201ENST00000401237 79 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 SNORD2.1-201ENST00000458762 69 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 snoU13.15-201ENST00000459407 104 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AC004223.1-201ENST00000479840 271 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AC079140.2-201ENST00000506193 142 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 RNU7-12P-201ENST00000516030 62 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1007P-201ENST00000516586 107 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 AL008718.3-201ENST00000610217 321 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 JPX_2.1-201ENST00000614161 69 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 MIR8063-201ENST00000621930 81 ntBASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.14-201ENST00000362415 103 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-199P-201ENST00000362954 107 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.193-201ENST00000363979 102 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.242-201ENST00000364473 110 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-740P-201ENST00000364734 105 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNA5SP259-201ENST00000365541 109 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-211P-201ENST00000384047 107 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.452-201ENST00000384202 108 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 MIR526A2-201ENST00000390198 65 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 snosnR66.1-201ENST00000391095 99 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 SNORA40.6-201ENST00000391153 128 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNA5SP496-201ENST00000391240 109 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 AC027119.1-201ENST00000440877 241 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1132P-201ENST00000459214 107 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 RPL39P38-201ENST00000467018 153 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 SUMO2P16-201ENST00000519475 264 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 MIR4282-201ENST00000583613 67 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 AC012433.1-201ENST00000588916 398 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 7SK.10-201ENST00000621414 298 ntBASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.19□□□□□ -2.22
CCDC28BQ9BUN5 ZNF209P-201ENST00000593450 2304 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-163P-201ENST00000384396 106 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1065P-201ENST00000384513 106 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNU2-38P-201ENST00000410856 79 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 HMGN2P32-201ENST00000444648 269 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNA5SP445-201ENST00000515889 115 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-902P-201ENST00000517212 91 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 MIR4724-201ENST00000579485 89 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 AC062037.2-201ENST00000610137 73 ntBASIC1.18□□□□□ -2.22
CCDC28BQ9BUN5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 MIR367-201ENST00000362299 68 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-1084P-201ENST00000362498 107 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.144-201ENST00000363521 113 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 RNU6-702P-201ENST00000364982 107 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 snoU2-30.1-201ENST00000365012 70 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.350-201ENST00000365409 98 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 SNORA2.2-201ENST00000365473 135 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.478-201ENST00000384358 107 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 MIR653-201ENST00000385279 96 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 AL603910.2-201ENST00000407268 136 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 SNORD45.4-201ENST00000516629 73 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 AC004817.2-201ENST00000561794 651 ntBASIC1.17□□□□□ -2.22
CCDC28BQ9BUN5 MIR4503-201ENST00000582187 83 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 306.8 ms