Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.23
CPNE1Q99829 SNORA25.1-201ENST00000362326 128 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 snoU2_19.2-201ENST00000363024 80 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 RNU6-514P-201ENST00000384208 107 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 SNORA25-201ENST00000384384 134 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 Y_RNA.541-201ENST00000384640 113 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 MIR516B2-201ENST00000385190 85 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 RNU6-482P-201ENST00000391068 107 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 MTCO2P33-201ENST00000402100 465 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 AC245047.7-201ENST00000440265 293 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 AC048334.1-201ENST00000477975 159 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 AC098869.1-201ENST00000481627 292 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 MRPS35P2-201ENST00000508242 191 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 RNU6-237P-201ENST00000515985 71 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 RNU6-1137P-201ENST00000517073 99 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 AC090142.3-201ENST00000519012 385 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 AP003733.2-201ENST00000529409 171 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 MIR4769-201ENST00000584126 77 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.15□□□□□ -2.23
CPNE1Q99829 AC134026.1-201ENST00000623249 2239 ntBASIC1.15□□□□□ -2.23
CPNE1Q99829 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CPNE1Q99829 SNORA7.1-201ENST00000363750 139 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU6-144P-201ENST00000383951 107 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 MIR618-201ENST00000385287 98 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU6-763P-201ENST00000390865 106 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU4-62P-201ENST00000410125 130 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.14□□□□□ -2.23
CPNE1Q99829 RPL21P38-201ENST00000418090 167 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 AL731563.1-201ENST00000442202 214 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 AC009474.2-201ENST00000451383 136 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU7-95P-201ENST00000459222 64 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 AL133373.1-201ENST00000497098 94 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU6-1007P-201ENST00000516586 107 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNU6-1153P-201ENST00000516760 105 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 SNORA70.22-201ENST00000517160 124 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 BX284668.6-201ENST00000606899 438 ntBASIC1.14□□□□□ -2.23
CPNE1Q99829 RNA5SP99-201ENST00000364020 114 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 RNU6-806P-201ENST00000365147 105 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 RNU6-442P-201ENST00000383968 104 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 MIR215-201ENST00000384858 110 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 MIR222-201ENST00000384992 110 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 MIR802-201ENST00000390235 94 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.13□□□□□ -2.23
CPNE1Q99829 RPS29P28-201ENST00000446439 141 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.13□□□□□ -2.23
CPNE1Q99829 SNORA74.3-201ENST00000517108 154 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.13□□□□□ -2.23
CPNE1Q99829 RPL23AP91-201ENST00000569211 455 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 AL096861.1-201ENST00000610899 123 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 AC027335.2-201ENST00000624030 375 ntBASIC1.13□□□□□ -2.23
CPNE1Q99829 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.13□□□□□ -2.23
CPNE1Q99829 RNA5SP432-201ENST00000362480 116 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 Y_RNA.64-201ENST00000362845 102 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 RNU6-1205P-201ENST00000363625 106 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 Y_RNA.242-201ENST00000364473 110 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 Y_RNA.422-201ENST00000384054 114 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 SNORD38C-201ENST00000384381 69 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 RNU6-910P-201ENST00000390844 107 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 NDUFA4P2-201ENST00000489989 244 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 RNU7-40P-201ENST00000516397 64 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
CPNE1Q99829 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
CPNE1Q99829 Y_RNA.26-201ENST00000362539 101 ntBASIC1.11□□□□□ -2.23
CPNE1Q99829 RNU6-1272P-201ENST00000362776 107 ntBASIC1.11□□□□□ -2.23
CPNE1Q99829 MIR1278-201ENST00000408753 81 ntBASIC1.11□□□□□ -2.23
CPNE1Q99829 AC091959.1-201ENST00000495857 238 ntBASIC1.11□□□□□ -2.23
CPNE1Q99829 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.11□□□□□ -2.23
CPNE1Q99829 AC013791.1-201ENST00000616619 62 ntBASIC1.11□□□□□ -2.23
CPNE1Q99829 MIR520C-201ENST00000385005 87 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 SNORD11-201ENST00000459124 84 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 Y_RNA.637-201ENST00000459424 114 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 SNORD116-28-201ENST00000516123 91 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 RNU7-43P-201ENST00000516554 64 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 SNORA18.7-201ENST00000516910 131 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 AC008507.4-201ENST00000585464 127 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC1.1□□□□□ -2.23
CPNE1Q99829 AL442644.1-201ENST00000454390 3105 ntBASIC1.1□□□□□ -2.23
CPNE1Q99829 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
CPNE1Q99829 Y_RNA.84-201ENST00000363011 104 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 SNORA70.7-201ENST00000384159 133 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 AC113618.1-201ENST00000416747 285 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 AC023449.1-201ENST00000454464 154 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 AC245047.8-201ENST00000456455 284 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 SNORA27.4-201ENST00000516650 95 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.09□□□□□ -2.23
CPNE1Q99829 MIR3192-201ENST00000584920 77 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 AL391903.3-201ENST00000612158 163 ntBASIC1.09□□□□□ -2.23
CPNE1Q99829 RNU1-124P-201ENST00000363861 145 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 SNORA80D-201ENST00000384488 135 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 BTF3P11-201ENST00000426582 477 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.08□□□□□ -2.24
CPNE1Q99829 SNORD123-201ENST00000459473 70 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 SERF1AP1-201ENST00000514575 187 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 SNORD79.1-201ENST00000516069 84 ntBASIC1.08□□□□□ -2.24
CPNE1Q99829 RNA5SP458-201ENST00000516188 119 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 418.8 ms