Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 RNY4P13-201ENST00000384284 96 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 MIR516B2-201ENST00000385190 85 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 SNORD2-201ENST00000459163 69 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.18□□□□□ -2.6
COL12A1Q99715 AL355375.2-201ENST00000574825 175 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 AC120024.2-201ENST00000576526 175 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 MIR4473-201ENST00000583731 91 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 AC104996.3-201ENST00000590718 94 ntBASIC-1.18□□□□□ -2.6
COL12A1Q99715 Y_RNA.42-201ENST00000362660 108 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 Y_RNA.248-201ENST00000364501 109 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RNU6-476P-201ENST00000384726 107 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 MTND3P17-201ENST00000416968 344 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.19□□□□□ -2.6
COL12A1Q99715 AL359881.1-201ENST00000602916 267 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 MESTIT1_1.1-201ENST00000618871 140 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 ZNF114P1-201ENST00000453500 292 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 AC099654.9-201ENST00000637055 678 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RNU6-1175P-201ENST00000365200 107 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RNU6-142P-201ENST00000384019 107 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RNU6-1310P-201ENST00000384153 107 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 RPS3AP52-201ENST00000435639 297 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 AL122001.1-201ENST00000457027 370 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 AL512347.1-201ENST00000566420 503 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 AL356055.1-201ENST00000602528 446 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 MIR8066-201ENST00000617280 78 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 Z97988.1-201ENST00000637697 135 ntBASIC-1.19□□□□□ -2.6
COL12A1Q99715 SNORA27.3-201ENST00000364937 134 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU6-596P-201ENST00000365395 98 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU6-207P-201ENST00000384137 107 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 MIR15B-201ENST00000385045 98 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU6-1025P-201ENST00000410629 104 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 MTND1P21-201ENST00000412991 285 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.2□□□□□ -2.6
COL12A1Q99715 AC016632.1-201ENST00000503994 196 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU2-56P-201ENST00000516826 190 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 AC069113.1-201ENST00000517763 267 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 MIR136-201ENST00000385207 82 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 SNORA75.4-201ENST00000391278 119 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU6-1186P-201ENST00000410429 97 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 AL365338.1-201ENST00000422282 858 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 RNU6-572P-201ENST00000516724 80 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 AC011603.4-201ENST00000611325 277 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 AL008636.1-201ENST00000625038 1018 ntBASIC-1.2□□□□□ -2.6
COL12A1Q99715 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 Y_RNA.360-201ENST00000365512 102 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 MIR617-201ENST00000385030 97 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 MTND3P5-201ENST00000512798 333 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU7-28P-201ENST00000516759 62 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU6-1116P-201ENST00000517269 99 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU4-20P-201ENST00000365601 151 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU6-245P-201ENST00000384020 107 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU6-800P-201ENST00000384473 103 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 SNORD93-201ENST00000408813 74 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 COX7BP2-201ENST00000437976 242 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU7-74P-201ENST00000459104 62 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 AC005178.1-201ENST00000508392 440 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU6-971P-201ENST00000516920 106 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 AL121655.1-201ENST00000605811 308 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 5S_rRNA.15-201ENST00000611169 127 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 DISC2.1-201ENST00000612827 205 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 AL358934.1-201ENST00000432346 324 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 RPL23AP30-201ENST00000432419 501 ntBASIC-1.21□□□□□ -2.6
COL12A1Q99715 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.21□□□□□ -2.6
COL12A1Q99715 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-1.21□□□□□ -2.6
COL12A1Q99715 RNU6-824P-201ENST00000363724 104 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 RNU6-336P-201ENST00000364891 107 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 RNU6-926P-201ENST00000384075 107 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 RNU6-154P-201ENST00000384306 106 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 MIR549A-201ENST00000385268 96 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 RNU6-592P-201ENST00000411333 103 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.22□□□□□ -2.6
COL12A1Q99715 RNU6-765P-201ENST00000516916 99 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 DPPA3P3-201ENST00000603842 430 ntBASIC-1.22□□□□□ -2.6
COL12A1Q99715 MIR525-201ENST00000384978 85 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 RNU6-1242P-201ENST00000391052 103 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 AL731768.1-201ENST00000603124 139 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 AC068880.4-201ENST00000623082 495 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.22□□□□□ -2.61
COL12A1Q99715 RNU6-690P-201ENST00000365242 106 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 RNU6-637P-201ENST00000384050 107 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 RNU6-131P-201ENST00000391144 107 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 VN1R10P-201ENST00000447106 875 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 AC007012.1-201ENST00000567192 175 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 MIR548AR-201ENST00000582191 57 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 AL391834.2-201ENST00000609982 546 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.23□□□□□ -2.61
COL12A1Q99715 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.23□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms