Protein–RNA interactions for Protein: Q96RS6

NUDCD1, NudC domain-containing protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1Q96RS6 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
NUDCD1Q96RS6 AL117187.1-201ENST00000555482 181 ntBASIC1.41□□□□□ -2.18
NUDCD1Q96RS6 AL121890.5-201ENST00000620848 304 ntBASIC1.41□□□□□ -2.18
NUDCD1Q96RS6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.140-201ENST00000363474 103 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU6-833P-201ENST00000363486 107 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.217-201ENST00000364214 105 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.237-201ENST00000364439 102 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 SNORD41-201ENST00000386967 70 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 BTF3P11-201ENST00000426582 477 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU7-95P-201ENST00000459222 64 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.641-201ENST00000459414 105 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU6-327P-201ENST00000516270 127 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 SNORA27.4-201ENST00000516650 95 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 DNAJC19P9-201ENST00000555084 351 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 CYP3A52P-201ENST00000563326 91 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 AC037487.3-201ENST00000606668 112 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 MIR8062-201ENST00000621515 85 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 AC027279.3-201ENST00000625055 122 ntBASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1309P-201ENST00000363305 108 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 RNU6-899P-201ENST00000363947 107 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 SNORD26-201ENST00000384147 75 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 RNU6-472P-201ENST00000384299 107 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 MIR653-201ENST00000385279 96 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 RNU6-131P-201ENST00000391144 107 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 AL358176.2-201ENST00000425769 204 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 RNU1-92P-201ENST00000517017 135 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 MIR3664-201ENST00000579074 99 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 MIR3124-201ENST00000582636 67 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 MIR4719-201ENST00000585233 84 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 AL008718.3-201ENST00000610217 321 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 AC013791.1-201ENST00000616619 62 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 snoU18.1-201ENST00000629629 71 ntBASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
NUDCD1Q96RS6 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1084P-201ENST00000362498 107 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.117-201ENST00000363294 101 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 RNU6-969P-201ENST00000383900 105 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.396-201ENST00000383949 103 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.461-201ENST00000384263 103 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 RNU6-383P-201ENST00000410864 94 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 AP1B1P2-201ENST00000416196 106 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 BTF3P4-201ENST00000418852 495 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 RNA5SP458-201ENST00000516188 119 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 MIR4421-201ENST00000578133 69 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.38□□□□□ -2.19
NUDCD1Q96RS6 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 MIR378A-201ENST00000362177 66 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.47-201ENST00000362697 108 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 RNU6-674P-201ENST00000363831 107 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 SNORA2.2-201ENST00000365473 135 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 MTND4LP30-201ENST00000454092 297 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 RPL23AP91-201ENST00000569211 455 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 MIR5692C2-201ENST00000577959 77 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 AL353621.2-201ENST00000605340 133 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 JPX_2.1-201ENST00000614161 69 ntBASIC1.37□□□□□ -2.19
NUDCD1Q96RS6 AL391987.6-201ENST00000305671 199 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 UBE2WP1-201ENST00000362030 340 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.162-201ENST00000363683 102 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.176-201ENST00000363815 109 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 RNU4-10P-201ENST00000364383 140 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 RNU6-939P-201ENST00000384634 107 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 MIR1302-6-201ENST00000408466 90 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 RNU6-651P-201ENST00000411040 105 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.275-201ENST00000364726 110 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 RNU6-1289P-201ENST00000384431 106 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 MIR758-201ENST00000390227 88 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 AC009474.2-201ENST00000451383 136 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 RNU1-123P-201ENST00000458950 160 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 SNORD11-201ENST00000459124 84 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
NUDCD1Q96RS6 RNA5SP432-201ENST00000362480 116 ntBASIC1.34□□□□□ -2.19
NUDCD1Q96RS6 Y_RNA.133-201ENST00000363428 110 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms