| ARAP1 | Q96P48 | LRRC34P1-201 | ENST00000542742 | 915 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | PIGPP4-201 | ENST00000584447 | 307 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR4999-201 | ENST00000585029 | 91 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.49-201 | ENST00000362714 | 112 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.270-201 | ENST00000364693 | 104 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-1292P-201 | ENST00000383856 | 107 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.450-201 | ENST00000384198 | 113 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-281P-201 | ENST00000384212 | 103 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR204-201 | ENST00000385200 | 110 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC244250.2-201 | ENST00000418731 | 148 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-1337P-201 | ENST00000516525 | 95 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC022166.2-201 | ENST00000566030 | 536 nt | TSL 4 BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR3682-201 | ENST00000581338 | 84 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | POLR3GP1-201 | ENST00000594073 | 261 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AL133255.1-201 | ENST00000606374 | 441 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | TUSC7.1-201 | ENST00000610969 | 165 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | SNORA70.25-201 | ENST00000612741 | 95 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AL158063.1-201 | ENST00000615349 | 536 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR8066-201 | ENST00000617280 | 78 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC006927.3-201 | ENST00000638789 | 384 nt | BASIC | -0.92 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC108866.1-201 | ENST00000503073 | 2339 nt | TSL 5 BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.13-201 | ENST00000362403 | 112 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | SNORD50.1-201 | ENST00000362987 | 71 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-214P-201 | ENST00000384130 | 107 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR196A1-201 | ENST00000388006 | 70 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC078851.1-201 | ENST00000415918 | 298 nt | TSL 3 BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNA5SP66-201 | ENST00000517178 | 101 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MTND4P7-201 | ENST00000523876 | 130 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | LINC01491-201 | ENST00000558434 | 505 nt | TSL 3 BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC005972.2-201 | ENST00000604690 | 348 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC006566.1-201 | ENST00000608943 | 513 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AP002371.2-201 | ENST00000624450 | 503 nt | BASIC | -0.93 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU5F-6P-201 | ENST00000362979 | 116 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-268P-201 | ENST00000364174 | 107 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-726P-201 | ENST00000364680 | 107 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-1257P-201 | ENST00000384625 | 110 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AL035258.1-201 | ENST00000439450 | 439 nt | TSL 3 BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MTCO1P29-201 | ENST00000496868 | 288 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR6082-201 | ENST00000613604 | 109 nt | BASIC | -0.94 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | DEFB131A-201 | ENST00000334879 | 213 nt | APPRIS P1 TSL 1 (best) BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR30D-201 | ENST00000362283 | 70 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.32-201 | ENST00000362589 | 110 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNY1P7-201 | ENST00000384743 | 110 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR516B1-201 | ENST00000385211 | 90 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MTCO3P38-201 | ENST00000468910 | 766 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | SNORA27.4-201 | ENST00000516650 | 95 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MTND1P24-201 | ENST00000552175 | 861 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC084365.1-201 | ENST00000552470 | 310 nt | TSL 3 BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AL357078.3-201 | ENST00000607528 | 618 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AL162376.1-201 | ENST00000624117 | 175 nt | BASIC | -0.95 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | MIR365A-201 | ENST00000362260 | 87 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.125-201 | ENST00000363371 | 111 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC023051.1-201 | ENST00000414098 | 876 nt | TSL 5 BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | GRM7-AS3-203 | ENST00000424366 | 486 nt | TSL 3 BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | ERLEC1P1-201 | ENST00000433806 | 578 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU7-73P-201 | ENST00000458743 | 63 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RPL7P42-201 | ENST00000481005 | 679 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU7-175P-201 | ENST00000515915 | 61 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.697-201 | ENST00000516776 | 113 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | AC005828.6-201 | ENST00000606610 | 232 nt | BASIC | -0.96 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | Y_RNA.243-201 | ENST00000364481 | 109 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | U8.6-201 | ENST00000364939 | 135 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-1264P-201 | ENST00000383891 | 107 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-790P-201 | ENST00000384479 | 105 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-456P-201 | ENST00000384493 | 107 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | TRAJ28-201 | ENST00000390509 | 66 nt | APPRIS P1 BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-602P-201 | ENST00000411155 | 105 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | FCF1P9-201 | ENST00000412546 | 282 nt | BASIC | -0.97 | □□□□□ -2.56 | | |
| ARAP1 | Q96P48 | RNU6-490P-201 | ENST00000362985 | 107 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | Y_RNA.110-201 | ENST00000363220 | 99 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU6-10P-201 | ENST00000384036 | 107 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | Y_RNA.517-201 | ENST00000384551 | 106 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | SNORD12C-201 | ENST00000386307 | 89 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU6-195P-201 | ENST00000411352 | 109 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | MTATP6P18-201 | ENST00000417994 | 673 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RPL30P10-201 | ENST00000488148 | 337 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC005609.4-201 | ENST00000625071 | 447 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC099654.13-201 | ENST00000639774 | 207 nt | BASIC | -0.98 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU6-454P-201 | ENST00000364292 | 107 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU6-47P-201 | ENST00000383866 | 107 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | Y_RNA.416-201 | ENST00000384014 | 113 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU6-517P-201 | ENST00000384362 | 110 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNY3P9-201 | ENST00000384727 | 106 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | PIGP-205 | ENST00000399103 | 656 nt | APPRIS P1 TSL 1 (best) BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | SNORD110-201 | ENST00000408189 | 75 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | SNRPGP14-201 | ENST00000435400 | 219 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU2-11P-201 | ENST00000459191 | 187 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | MTND5P34-201 | ENST00000568888 | 325 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | MIR4491-201 | ENST00000581087 | 68 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | Z97988.1-201 | ENST00000637697 | 135 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC073869.9-201 | ENST00000641610 | 120 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | MIR876-201 | ENST00000401147 | 81 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | RNU2-72P-201 | ENST00000411175 | 163 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC083900.1-201 | ENST00000421964 | 469 nt | TSL 2 BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | MTATP6P26-201 | ENST00000445926 | 662 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC021146.6-201 | ENST00000514659 | 117 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC093023.1-201 | ENST00000547375 | 507 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC092807.2-201 | ENST00000609367 | 243 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | HULC.1-201 | ENST00000612720 | 240 nt | BASIC | -0.99 | □□□□□ -2.57 | | |
| ARAP1 | Q96P48 | AC093726.3-201 | ENST00000637588 | 150 nt | BASIC | -0.99 | □□□□□ -2.57 | | |