Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 SNORA75.4-201ENST00000391278 119 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 AL031003.1-201ENST00000404229 172 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 RNU6-584P-201ENST00000410350 95 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 RNU2-61P-201ENST00000411069 191 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 AC083798.1-201ENST00000472671 131 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 AC009094.1-201ENST00000564443 426 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 AC097520.1-201ENST00000624435 385 ntBASIC-0.78□□□□□ -2.53
CCDC42Q96M95 Y_RNA.1-201ENST00000352915 104 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 RNU6-879P-201ENST00000364328 108 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 RNA5SP300-201ENST00000391197 107 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 SNORA26.8-201ENST00000391306 124 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 MIR4752-201ENST00000579672 72 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 AC040904.1-201ENST00000590850 223 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 MIR8064-201ENST00000612863 90 ntBASIC-0.79□□□□□ -2.54
CCDC42Q96M95 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 SNORA69-201ENST00000383895 132 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 SNORD28-201ENST00000384706 75 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.8□□□□□ -2.54
CCDC42Q96M95 AC107297.1-201ENST00000459991 176 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 RNU6-89P-201ENST00000606519 100 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 AP001330.5-201ENST00000607176 411 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 AC006441.5-201ENST00000612680 209 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 MIR6779-201ENST00000617283 64 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 Z97988.1-201ENST00000637697 135 ntBASIC-0.8□□□□□ -2.54
CCDC42Q96M95 MIR30D-201ENST00000362283 70 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 Y_RNA.364-201ENST00000365532 101 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 MIR215-201ENST00000384858 110 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 SNORD126-201ENST00000459475 77 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 MIR4639-201ENST00000584938 69 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 AC011921.3-201ENST00000605540 361 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 JPX_2.1-201ENST00000614161 69 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.81□□□□□ -2.54
CCDC42Q96M95 RNA5SP257-201ENST00000363023 116 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 MIR501-201ENST00000390204 84 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 RNU6-192P-201ENST00000391253 100 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 MIR190B-201ENST00000401119 79 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 MTND2P39-201ENST00000457230 764 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 SNORA31.14-201ENST00000516728 116 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 RNU2-60P-201ENST00000517290 128 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 AC006600.1-201ENST00000572529 153 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.82□□□□□ -2.54
CCDC42Q96M95 MIR8055-201ENST00000610739 97 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 AC004467.1-201ENST00000615678 330 ntBASIC-0.82□□□□□ -2.54
CCDC42Q96M95 RNU6-740P-201ENST00000364734 105 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 RNU6-767P-201ENST00000384132 107 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 RNU6-648P-201ENST00000410190 107 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 RNU4-83P-201ENST00000410863 133 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 CHEK2P4-201ENST00000450340 246 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 ZNF519P2-201ENST00000557032 169 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 MIR548AD-201ENST00000584780 82 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 AC008507.4-201ENST00000585464 127 ntBASIC-0.83□□□□□ -2.54
CCDC42Q96M95 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 RNU6-923P-201ENST00000364753 107 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 Y_RNA.372-201ENST00000365599 102 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 Y_RNA.557-201ENST00000384680 107 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 ERLEC1P1-201ENST00000433806 578 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 RNU7-67P-201ENST00000459003 62 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 RNA5SP285-201ENST00000516619 119 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 LRRC34P1-201ENST00000542742 915 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 MIR4528-201ENST00000577763 90 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 AC006157.1-201ENST00000611750 366 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 MIR548AZ-201ENST00000616567 95 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 MIR6759-201ENST00000638110 65 ntBASIC-0.84□□□□□ -2.54
CCDC42Q96M95 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 RNU6-318P-201ENST00000384283 103 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 SNORA32.3-201ENST00000384772 121 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 SNORD93-201ENST00000408813 74 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 AL365203.2-201ENST00000423444 196 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC-0.85□□□□□ -2.55
CCDC42Q96M95 AL138752.1-201ENST00000452964 351 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 RNU7-73P-201ENST00000458743 63 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-0.85□□□□□ -2.55
CCDC42Q96M95 POLR3GP1-201ENST00000594073 261 ntBASIC-0.85□□□□□ -2.55
CCDC42Q96M95 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 MTND3P21-201ENST00000433774 331 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 RNU6-835P-201ENST00000516974 104 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 MTATP6P24-201ENST00000576835 677 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 MIR5701-3-201ENST00000578890 82 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 MIR5701-1-201ENST00000585138 82 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 AL442067.1-201ENST00000613261 223 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 MIR5701-2-201ENST00000615634 82 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 uc_338.36-201ENST00000622331 158 ntBASIC-0.86□□□□□ -2.55
CCDC42Q96M95 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.87□□□□□ -2.55
CCDC42Q96M95 FCF1P9-201ENST00000412546 282 ntBASIC-0.87□□□□□ -2.55
CCDC42Q96M95 HMGN2P22-201ENST00000427588 175 ntBASIC-0.87□□□□□ -2.55
CCDC42Q96M95 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.87□□□□□ -2.55
CCDC42Q96M95 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.87□□□□□ -2.55
CCDC42Q96M95 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.87□□□□□ -2.55
CCDC42Q96M95 RNU7-116P-201ENST00000516940 62 ntBASIC-0.87□□□□□ -2.55
CCDC42Q96M95 FTX_2.1-201ENST00000618816 94 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms