Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNA5SP404-201ENST00000517118 132 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 RNU6-897P-201ENST00000517135 105 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 MIR3145-201ENST00000580727 82 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 AP003357.1-201ENST00000604497 148 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 MIR6788-201ENST00000618842 66 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 AC027279.3-201ENST00000625055 122 ntBASIC1.1□□□□□ -2.23
SNRNP40Q96DI7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 RNU6-1084P-201ENST00000362498 107 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.216-201ENST00000364205 93 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.455-201ENST00000384230 98 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 AC114811.1-201ENST00000507207 168 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 RNU7-116P-201ENST00000516940 62 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.714-201ENST00000517065 90 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 AC068338.1-201ENST00000565567 176 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 MIR4680-201ENST00000580906 66 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 MIR151B-201ENST00000584249 96 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 AL355297.3-201ENST00000604082 446 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 MIR6767-201ENST00000637302 66 ntBASIC1.09□□□□□ -2.23
SNRNP40Q96DI7 Y_RNA.11-201ENST00000362375 109 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.105-201ENST00000363182 111 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.136-201ENST00000363444 102 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 SNORD113-8-201ENST00000363497 74 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.418-201ENST00000384029 102 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 RNU6-102P-201ENST00000384485 104 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 MIR758-201ENST00000390227 88 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.581-201ENST00000391017 97 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 MIR548J-201ENST00000408833 112 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 RNU6-121P-201ENST00000410525 99 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 POLR2KP2-201ENST00000438155 177 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 AC245047.7-201ENST00000440265 293 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 HSPE1P25-201ENST00000455484 251 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 AC113195.1-201ENST00000579952 141 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 MIR4295-201ENST00000585286 85 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 PVT1_3.1-201ENST00000620853 95 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 AC027335.2-201ENST00000624030 375 ntBASIC1.08□□□□□ -2.24
SNRNP40Q96DI7 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 RNU4-80P-201ENST00000363200 141 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 SNORD114-26-201ENST00000363543 72 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 MIR522-201ENST00000385071 87 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 RNU6-1054P-201ENST00000411293 104 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 AC087343.1-201ENST00000477341 475 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 SNORD111.1-201ENST00000516421 86 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 AC127455.1-201ENST00000565496 145 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 AL356055.1-201ENST00000602528 446 ntBASIC1.07□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.202-201ENST00000364083 110 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 RNU6-1227P-201ENST00000383981 107 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 RNU6-1248P-201ENST00000391096 64 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 RNU7-115P-201ENST00000516433 55 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 AC136628.3-201ENST00000521868 290 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 AC024405.2-202ENST00000532731 184 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 POLR3GP1-201ENST00000594073 261 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 MIR548AY-201ENST00000617669 107 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
SNRNP40Q96DI7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU4-90P-201ENST00000362773 141 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.214-201ENST00000364201 112 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 U8.7-201ENST00000364940 136 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 SNORA33.2-201ENST00000365413 134 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-969P-201ENST00000383900 105 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 SNORA72.4-201ENST00000384174 132 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-342P-201ENST00000384521 104 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.527-201ENST00000384573 102 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 MIR526A1-201ENST00000384897 85 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-131P-201ENST00000391144 107 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 AC063976.4-201ENST00000421971 163 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 ELOCP20-201ENST00000422460 345 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-191P-201ENST00000516295 94 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-113P-201ENST00000516653 101 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 RNU6-1137P-201ENST00000517073 99 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 AC131281.1-201ENST00000522984 164 ntBASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.05□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.153-201ENST00000363615 91 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 RNU6-801P-201ENST00000364087 105 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 snoU2-30.1-201ENST00000365012 70 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.336-201ENST00000365307 109 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 SNORA80D-201ENST00000384488 135 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 SNORD12-201ENST00000391002 90 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 MIR1298-201ENST00000408783 112 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 Y_RNA.602-201ENST00000410535 92 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 AC005534.2-201ENST00000431047 433 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 RPS23P4-201ENST00000487908 423 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 SNORD116-28-201ENST00000516123 91 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 AC044792.1-201ENST00000593294 196 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 MIR6779-201ENST00000617283 64 ntBASIC1.04□□□□□ -2.24
SNRNP40Q96DI7 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 163.1 ms