Protein–RNA interactions for Protein: Q92890

UFD1, Ubiquitin recognition factor in ER-associated degradation protein 1, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1Q92890 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 RNA5SP95-201ENST00000410319 137 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.51□□□□□ -2.33
UFD1Q92890 RNU7-110P-201ENST00000516891 62 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 AP003484.1-201ENST00000530974 250 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 AL355375.2-201ENST00000574825 175 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 AC084781.2-201ENST00000615568 161 ntBASIC0.51□□□□□ -2.33
UFD1Q92890 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
UFD1Q92890 RNU6-1115P-201ENST00000362490 106 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 RNU6-268P-201ENST00000364174 107 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 Y_RNA.458-201ENST00000384240 102 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 MIR570-201ENST00000384917 97 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 U8.17-201ENST00000391292 132 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 AC244098.3-201ENST00000424803 96 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 RNU7-152P-201ENST00000458982 64 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 HMGN1P10-201ENST00000474557 553 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 MIR2115-201ENST00000516657 100 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.5□□□□□ -2.33
UFD1Q92890 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.5□□□□□ -2.33
UFD1Q92890 MIR3145-201ENST00000580727 82 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 AL121655.1-201ENST00000605811 308 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 AL132765.2-201ENST00000610812 351 ntBASIC0.5□□□□□ -2.33
UFD1Q92890 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
UFD1Q92890 Y_RNA.390-201ENST00000383932 102 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 Y_RNA.496-201ENST00000384444 101 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 MIR508-201ENST00000384857 115 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.49□□□□□ -2.33
UFD1Q92890 RBMX2P4-201ENST00000441256 376 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 RNU4-54P-201ENST00000516428 129 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 AC011195.1-201ENST00000578177 177 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 MIR2681-201ENST00000581814 105 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 MIR3124-201ENST00000582636 67 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 AC008507.4-201ENST00000585464 127 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 AC012433.1-201ENST00000588916 398 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 RPS29P30-201ENST00000600975 111 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 AC092447.9-201ENST00000603395 144 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 AL138825.1-201ENST00000618587 192 ntBASIC0.49□□□□□ -2.33
UFD1Q92890 Y_RNA.39-201ENST00000362620 98 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 Y_RNA.168-201ENST00000363740 102 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 Y_RNA.187-201ENST00000363918 113 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 SNORA51.10-201ENST00000384418 136 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 Y_RNA.551-201ENST00000384661 102 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 SNORD105-201ENST00000386910 85 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 MTCO2P33-201ENST00000402100 465 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 RNU4-30P-201ENST00000410245 143 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 AL157398.1-201ENST00000452981 186 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 RNU6-437P-201ENST00000459408 95 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 RNA5SP102-201ENST00000516865 106 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 MIR4300-201ENST00000581016 96 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 AC136443.5-201ENST00000603741 370 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 AL080274.1-201ENST00000605565 220 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 AC104985.2-201ENST00000620598 500 ntBASIC0.48□□□□□ -2.33
UFD1Q92890 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 MIR373-201ENST00000362273 69 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU6-396P-201ENST00000365369 105 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 SNORD63-201ENST00000384262 68 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU6-937P-201ENST00000384325 106 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 Y_RNA.537-201ENST00000384626 109 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU6-21P-201ENST00000384710 107 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 MTND1P14-201ENST00000427400 950 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 AL160004.2-201ENST00000432935 350 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.47□□□□□ -2.33
UFD1Q92890 Y_RNA.632-201ENST00000459189 102 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 SNORA40.14-201ENST00000516543 86 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU4-77P-201ENST00000516692 156 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU7-181P-201ENST00000517234 74 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 AC004812.1-201ENST00000540773 146 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 AC018659.1-201ENST00000551083 169 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 UBE2V2P2-201ENST00000587677 504 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 AC015726.2-201ENST00000620112 122 ntBASIC0.47□□□□□ -2.33
UFD1Q92890 RNU6-674P-201ENST00000363831 107 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 RNU1-115P-201ENST00000365329 160 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 Y_RNA.439-201ENST00000384119 94 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 MIR520E-201ENST00000384867 87 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 SNORD72-201ENST00000390994 80 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 MIR1278-201ENST00000408753 81 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 SNORA36B-201ENST00000410438 131 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 AL603825.1-201ENST00000438481 80 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 RNU7-141P-201ENST00000459304 62 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 Y_RNA.661-201ENST00000516003 99 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.46□□□□□ -2.34
UFD1Q92890 RPL23AP91-201ENST00000569211 455 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 MIR548AO-201ENST00000579992 96 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 AC104695.3-201ENST00000604052 296 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 AL606534.2-204ENST00000635008 178 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 AC068700.1-201ENST00000565862 3754 ntBASIC0.46□□□□□ -2.34
UFD1Q92890 Y_RNA.70-201ENST00000362886 110 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 RNU6-1048P-201ENST00000364054 107 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 Y_RNA.252-201ENST00000364556 101 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 SNORA1.2-201ENST00000365189 134 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 AL603910.2-201ENST00000407268 136 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 RNA5SP222-201ENST00000411039 105 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 RNU2-14P-201ENST00000411053 191 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 SNORD11-201ENST00000459124 84 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 Y_RNA.638-201ENST00000459374 113 ntBASIC0.45□□□□□ -2.34
UFD1Q92890 SNORD19B-201ENST00000459623 84 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 166.4 ms