Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 Y_RNA.676-201ENST00000516393 96 ntBASIC1.53□□□□□ -2.16
SLC44A1Q8WWI5 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.53□□□□□ -2.16
SLC44A1Q8WWI5 MIR2681-201ENST00000581814 105 ntBASIC1.53□□□□□ -2.16
SLC44A1Q8WWI5 AL591926.4-201ENST00000616895 298 ntBASIC1.53□□□□□ -2.16
SLC44A1Q8WWI5 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.53□□□□□ -2.17
SLC44A1Q8WWI5 AP000648.3-201ENST00000623539 4507 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 MIR660-201ENST00000385235 97 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 AC004965.1-201ENST00000413033 213 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 AC108667.1-201ENST00000428618 249 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-1023P-201ENST00000516137 106 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 AP000942.3-201ENST00000603702 160 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 BX248123.2-201ENST00000606318 124 ntBASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
SLC44A1Q8WWI5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.122-201ENST00000363331 96 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.796-201ENST00000364268 102 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.799-201ENST00000364992 102 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.338-201ENST00000365320 114 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 MIR522-201ENST00000385071 87 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 MIR526A2-201ENST00000390198 65 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 MIR1304-201ENST00000408243 91 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.590-201ENST00000410140 107 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 CALM2P4-201ENST00000430810 426 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC023790.1-201ENST00000482174 347 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 RNA5SP168-201ENST00000516642 112 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 MIR4643-201ENST00000577473 78 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC015688.6-201ENST00000577737 104 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC027279.3-201ENST00000625055 122 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC095038.3-201ENST00000634439 195 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 AC068700.1-201ENST00000565862 3754 ntBASIC1.51□□□□□ -2.17
SLC44A1Q8WWI5 MIR302D-201ENST00000362275 68 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.307-201ENST00000365022 117 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.401-201ENST00000383965 117 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 MT-TG-201ENST00000387429 68 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.618-201ENST00000410949 107 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 HSPE1P24-201ENST00000450782 238 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 snoU13.9-201ENST00000458927 103 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 RNU1-98P-201ENST00000458992 160 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 CYCTP-201ENST00000504253 315 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.714-201ENST00000517065 90 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 AC087685.1-201ENST00000587507 141 ntBASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.5□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.54-201ENST00000362766 105 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.277-201ENST00000364754 102 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.304-201ENST00000365011 112 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-338P-201ENST00000383888 105 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.447-201ENST00000384184 113 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 U8.16-201ENST00000391279 133 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 MIR1323-201ENST00000408090 73 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-651P-201ENST00000411040 105 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 SNRPGP10-201ENST00000432323 225 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AC100767.1-201ENST00000528178 123 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 MIR3128-201ENST00000581957 66 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AC120024.3-201ENST00000603167 156 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AL021707.8-201ENST00000609428 183 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 AL442067.1-201ENST00000613261 223 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 JPX_2.1-201ENST00000614161 69 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.802-201ENST00000614892 130 ntBASIC1.49□□□□□ -2.17
SLC44A1Q8WWI5 MIR367-201ENST00000362299 68 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 SNORD68-201ENST00000363214 84 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-833P-201ENST00000363486 107 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-1209P-201ENST00000363655 107 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNU1-42P-201ENST00000364033 160 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.539-201ENST00000384635 107 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNU6-131P-201ENST00000391144 107 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNA5SP496-201ENST00000391240 109 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 SNORD11-201ENST00000459124 84 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 AC108729.3-201ENST00000513484 108 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.679-201ENST00000516416 91 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.680-201ENST00000516441 93 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 MIR4724-201ENST00000579485 89 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 MIR4303-201ENST00000581299 66 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 AC011921.3-201ENST00000605540 361 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 SNORD3E-202ENST00000627253 216 ntBASIC1.48□□□□□ -2.17
SLC44A1Q8WWI5 ICE2P2-201ENST00000483823 2787 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.76-201ENST00000362931 109 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.293-201ENST00000364908 93 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 SNORA8.3-201ENST00000384679 139 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 MIR517C-201ENST00000385103 95 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 RNU4-62P-201ENST00000410125 130 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.673-201ENST00000516306 88 ntBASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
SLC44A1Q8WWI5 Y_RNA.60-201ENST00000362831 98 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 SNORD27-201ENST00000363981 72 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 RNY1-201ENST00000364228 113 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 SNORA20.1-201ENST00000364790 130 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 Y_RNA.477-201ENST00000384352 108 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 COX6CP14-201ENST00000469580 174 ntBASIC1.46□□□□□ -2.18
SLC44A1Q8WWI5 NDUFA4P2-201ENST00000489989 244 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 267 ms