Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MIR4999-201ENST00000585029 91 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 AC011458.1-201ENST00000604034 617 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 AC103705.1-201ENST00000619013 241 ntBASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.23□□□□□ -2.61
SPTSSBQ8NFR3 RNU4-75P-201ENST00000364621 146 ntBASIC-1.24□□□□□ -2.61
SPTSSBQ8NFR3 SNORD12C-201ENST00000386307 89 ntBASIC-1.24□□□□□ -2.61
SPTSSBQ8NFR3 IGKV1-22-201ENST00000524313 326 ntBASIC-1.24□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-403P-201ENST00000363163 104 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-517P-201ENST00000384362 110 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 RNA5SP118-201ENST00000410385 109 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AC096949.1-201ENST00000412047 152 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AL356010.1-201ENST00000456364 102 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 RNU7-67P-201ENST00000459003 62 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-189P-201ENST00000516120 101 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 SCARNA17-201ENST00000516183 144 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AC093023.1-201ENST00000547375 507 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 MIR5692C1-201ENST00000585309 91 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AL360085.1-201ENST00000604713 532 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AC109347.2-201ENST00000610220 349 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 TUSC7.1-201ENST00000610969 165 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AC087683.2-201ENST00000611384 326 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 AL391262.2-201ENST00000622466 494 ntBASIC-1.25□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-34-201ENST00000362441 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-12-201ENST00000362583 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-29-201ENST00000362834 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-9-201ENST00000362912 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-21-201ENST00000362963 81 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-14-201ENST00000363090 81 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-13-201ENST00000363358 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-41-201ENST00000363608 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-11-201ENST00000363616 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-5-201ENST00000363633 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-39-201ENST00000363694 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-4-201ENST00000363810 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-16-201ENST00000363887 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-6-201ENST00000363942 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-30-201ENST00000364117 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-42-201ENST00000364273 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-15-201ENST00000364809 81 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-1-201ENST00000364961 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-26-201ENST00000365067 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-10-201ENST00000365073 81 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-43-201ENST00000365503 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-36-201ENST00000365629 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 RNY3P9-201ENST00000384727 106 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MIR516B1-201ENST00000385211 90 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD41.1-201ENST00000391000 69 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-1001P-201ENST00000411265 100 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 HMGN1P33-201ENST00000432945 451 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MTCO2P30-201ENST00000503662 364 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 AC021146.6-201ENST00000514659 117 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 RNA5SP480-201ENST00000516840 109 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MIR4491-201ENST00000581087 68 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MIR3682-201ENST00000581338 84 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MIR4424-201ENST00000585257 86 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 AL133255.1-201ENST00000606374 441 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 SNORD115-40-201ENST00000606510 82 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 AC105081.1-201ENST00000617727 106 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 MIR3674-201ENST00000636576 68 ntBASIC-1.26□□□□□ -2.61
SPTSSBQ8NFR3 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-500P-201ENST00000362349 107 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.118-201ENST00000363300 101 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNY4P34-201ENST00000364779 95 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-1145P-201ENST00000384246 107 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-636P-201ENST00000384598 107 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 U8.15-201ENST00000390947 134 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 BX276092.1-201ENST00000427368 251 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 AC024405.2-202ENST00000532731 184 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 AC008507.4-201ENST00000585464 127 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 POLR3GP2-201ENST00000588366 668 ntBASIC-1.27□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.172-201ENST00000363765 102 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNA5SP245-201ENST00000364239 121 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU4-36P-201ENST00000364294 144 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 SNORD110-201ENST00000408189 75 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-195P-201ENST00000411352 109 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-966P-201ENST00000516479 104 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-881P-201ENST00000516813 102 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-958P-201ENST00000516995 106 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 MTND4P7-201ENST00000523876 130 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 AP002963.1-201ENST00000530590 184 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 AP000942.4-201ENST00000604811 241 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 AC009161.2-201ENST00000624626 138 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 AC007671.2-201ENST00000637344 619 ntBASIC-1.28□□□□□ -2.61
SPTSSBQ8NFR3 RNU6-82P-201ENST00000363970 107 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 AC006210.1-201ENST00000424882 111 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 MTATP6P23-201ENST00000440153 476 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 AL357078.3-201ENST00000607528 618 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 AC022960.3-201ENST00000619794 441 ntBASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-1.29□□□□□ -2.62
SPTSSBQ8NFR3 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.3□□□□□ -2.62
SPTSSBQ8NFR3 SNORD113-7-201ENST00000363762 77 ntBASIC-1.3□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 178.6 ms