Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 SNORD114-6-201ENST00000364393 72 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.634-201ENST00000364811 113 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 MIR520G-201ENST00000385064 90 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 RNA5SP467-201ENST00000391274 118 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AL445646.1-201ENST00000431784 216 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 RNU7-99P-201ENST00000516271 62 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 Y_RNA.676-201ENST00000516393 96 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 RNA5SP153-201ENST00000516498 76 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 RNU7-149P-201ENST00000516739 59 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 RNA5SP402-201ENST00000517148 110 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AC090142.3-201ENST00000519012 385 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AC091178.2-201ENST00000584401 117 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AC007229.1-201ENST00000590455 412 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AL359881.1-201ENST00000602916 267 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 AC097639.2-201ENST00000603159 172 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 MIR338-201ENST00000636369 67 ntBASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
SHCBP1Q8NEM2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 SNORD20-201ENST00000384550 80 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 U8.13-201ENST00000390842 128 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.584-201ENST00000391090 114 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 RNU2-70P-201ENST00000410718 179 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 SRIP3-201ENST00000413200 219 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 AL353689.1-201ENST00000438895 199 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 AC023449.1-201ENST00000454464 154 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 RNU4-57P-201ENST00000515980 135 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 RNA5SP458-201ENST00000516188 119 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 JPX_2.1-201ENST00000614161 69 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 U6.108-201ENST00000637764 58 ntBASIC2.46□□□□□ -2.02
SHCBP1Q8NEM2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 SNORA33-201ENST00000363664 130 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 SNORA25.7-201ENST00000364375 127 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.273-201ENST00000364703 102 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.621-201ENST00000411065 96 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 NDUFA4P2-201ENST00000489989 244 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-659P-201ENST00000516454 104 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.686-201ENST00000516548 134 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-1291P-201ENST00000516591 104 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 AL353149.1-201ENST00000610667 244 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 AL137847.3-201ENST00000611521 109 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 Pinc.1-201ENST00000616452 154 ntBASIC2.45□□□□□ -2.02
SHCBP1Q8NEM2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.99-201ENST00000363138 105 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.294-201ENST00000364916 102 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-1138P-201ENST00000365359 106 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.353-201ENST00000365440 108 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 RNU1-52P-201ENST00000384190 164 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.525-201ENST00000384570 113 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 SNORA80E-201ENST00000384744 137 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 MIR1262-201ENST00000408276 93 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 EDDM3CP-201ENST00000415977 425 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AC233266.1-201ENST00000454518 96 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 RNU7-107P-201ENST00000459121 61 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 OR9P1P-201ENST00000496431 281 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 NDUFA5P6-201ENST00000542110 379 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AC242852.1-201ENST00000612151 96 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AL359075.3-201ENST00000613288 217 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 AC244015.1-201ENST00000622301 99 ntBASIC2.44□□□□□ -2.02
SHCBP1Q8NEM2 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 U8.1-201ENST00000362843 134 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-215P-201ENST00000365169 102 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.486-201ENST00000384398 107 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 SNORA26.9-201ENST00000391322 122 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 AL117342.1-201ENST00000404861 406 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 MIR6079-201ENST00000635807 62 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 AC131280.1-202ENST00000624067 4211 ntBASIC2.43□□□□□ -2.02
SHCBP1Q8NEM2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.253-201ENST00000364562 112 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 RNU1-51P-201ENST00000365345 176 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 SNORA6-201ENST00000384033 151 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 AC009238.1-201ENST00000442165 424 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 AC009237.6-201ENST00000446969 424 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 RNU1-131P-201ENST00000458943 161 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 HMGN1P7-201ENST00000491722 313 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-295P-201ENST00000516901 104 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 AC245884.12-201ENST00000615364 59 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
SHCBP1Q8NEM2 AC018630.2-201ENST00000534866 2403 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 Y_RNA.66-201ENST00000362862 102 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 SNORA12.1-201ENST00000390873 148 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 SNORA26-201ENST00000391286 122 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 ATP5J2P3-201ENST00000451550 258 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 RNU6-341P-201ENST00000516973 96 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 MIR4662B-201ENST00000579498 81 ntBASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
SHCBP1Q8NEM2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 185.1 ms