Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 RNU6-1270P-201ENST00000517128 108 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 DEFB122-202ENST00000569013 197 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 MIR3198-2-201ENST00000577868 80 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 MIR5195-201ENST00000583555 115 ntBASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CLRN3Q8NCR9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 MIR513A1-201ENST00000385138 129 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AC022018.1-201ENST00000430685 241 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AL135938.1-201ENST00000443141 297 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 RPL23AP42-201ENST00000471152 471 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 RNU6-830P-201ENST00000516353 107 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AC007179.3-201ENST00000604976 235 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AC015726.2-201ENST00000620112 122 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AC095038.3-201ENST00000634439 195 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AL442644.1-201ENST00000454390 3105 ntBASIC2.01□□□□□ -2.09
CLRN3Q8NCR9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2□□□□□ -2.09
CLRN3Q8NCR9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.398-201ENST00000383952 99 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 RNU2-40P-201ENST00000410833 196 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 AC008413.1-201ENST00000511864 177 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 SNORA74D-201ENST00000516404 141 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 MIR514B-201ENST00000516774 80 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 AC090142.3-201ENST00000519012 385 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 SUMO2P16-201ENST00000519475 264 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 SNORA77B-201ENST00000578179 125 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 AL365205.2-201ENST00000594586 68 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.778-201ENST00000620203 90 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 AC021753.1-201ENST00000635724 168 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 MIR6844-201ENST00000637122 62 ntBASIC2□□□□□ -2.09
CLRN3Q8NCR9 AL359851.1-201ENST00000569460 4997 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 MIR422A-201ENST00000362286 90 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 SNORA2.2-201ENST00000365473 135 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RNA5SP259-201ENST00000365541 109 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 SNORA9-201ENST00000384215 133 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 SNORA54-201ENST00000384281 123 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.547-201ENST00000384654 119 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RNU6-768P-201ENST00000384683 107 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 MIR676-201ENST00000390702 67 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 SNORD37.2-201ENST00000391075 66 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 SNORA75.5-201ENST00000391291 81 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 AC104435.1-201ENST00000483483 166 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RN7SL504P-201ENST00000494496 287 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RNU6-322P-201ENST00000516010 103 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RNU7-25P-201ENST00000516544 62 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 RNU6-255P-201ENST00000516957 105 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 AC007751.1-201ENST00000529260 376 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 AC134878.1-201ENST00000619901 243 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 AC096644.4-201ENST00000563417 2912 ntBASIC1.99□□□□□ -2.09
CLRN3Q8NCR9 ICE2P2-201ENST00000483823 2787 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.170-201ENST00000363746 110 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 SNORD115-28-201ENST00000363931 81 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 RNU6-1130P-201ENST00000365434 107 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 MIR518F-201ENST00000384973 87 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 SNORA11-201ENST00000408789 128 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 AC087499.4-201ENST00000448505 178 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 AC096725.1-201ENST00000514266 313 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 AC015688.6-201ENST00000577737 104 ntBASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
CLRN3Q8NCR9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNU6-151P-201ENST00000364158 107 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNA5SP138-201ENST00000365098 114 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNU6-1292P-201ENST00000383856 107 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNY1P5-201ENST00000383890 115 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 Y_RNA.410-201ENST00000383992 113 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 MIR548A2-201ENST00000384956 97 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 MIR516B2-201ENST00000385190 85 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 AL445646.1-201ENST00000431784 216 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 AL021397.1-201ENST00000451806 248 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 BX510359.1-201ENST00000456973 237 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNU6-717P-201ENST00000459076 104 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNA5SP282-201ENST00000516355 108 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 MIR8057-201ENST00000620957 69 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 uc_338.20-201ENST00000621563 178 ntBASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CLRN3Q8NCR9 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 Y_RNA.400-201ENST00000383963 111 ntBASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 SNORA67.3-201ENST00000384366 140 ntBASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 RNA5SP127-201ENST00000411051 133 ntBASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 RNU7-200P-201ENST00000516105 62 ntBASIC1.96□□□□□ -2.1
CLRN3Q8NCR9 SNORA18.4-201ENST00000516440 124 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms