Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 Z98949.2-201ENST00000440996 144 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 AC079140.2-201ENST00000506193 142 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 SCARNA15.1-201ENST00000516384 125 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 RNU7-116P-201ENST00000516940 62 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 AC136628.3-201ENST00000521868 290 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.7□□□□□ -2.14
USP38Q8NB14 MIR3937-201ENST00000580135 106 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 MIR548AY-201ENST00000617669 107 ntBASIC1.7□□□□□ -2.14
USP38Q8NB14 Y_RNA.136-201ENST00000363444 102 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 SNORD1A-201ENST00000364968 72 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 RNU6-338P-201ENST00000383888 105 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 RNU6-1323P-201ENST00000384025 107 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 MTND2P23-201ENST00000422990 651 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 AC104332.1-201ENST00000440471 797 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 AC093850.1-201ENST00000454121 251 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 RNU7-141P-201ENST00000459304 62 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 RNU7-115P-201ENST00000516433 55 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 RNU6-1116P-201ENST00000517269 99 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 DEFB108E-201ENST00000524692 240 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 AL591926.4-201ENST00000616895 298 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 AL513423.1-201ENST00000621695 132 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.69□□□□□ -2.14
USP38Q8NB14 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
USP38Q8NB14 AC099654.10-201ENST00000640395 161 ntBASIC1.69□□□□□ -2.14
USP38Q8NB14 Y_RNA.176-201ENST00000363815 109 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 RNU6-801P-201ENST00000364087 105 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 RNU6-326P-201ENST00000365480 107 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 RNU6-424P-201ENST00000384367 105 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 RNU6-163P-201ENST00000384396 106 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 MIR660-201ENST00000385235 97 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 PIGPP3-201ENST00000425307 415 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 MTND4LP30-201ENST00000454092 297 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 TRBVB-201ENST00000477100 408 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 AL353621.2-201ENST00000605340 133 ntBASIC1.68□□□□□ -2.14
USP38Q8NB14 RNU6-1309P-201ENST00000363305 108 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 SNORD114-27-201ENST00000363766 70 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 Y_RNA.253-201ENST00000364562 112 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 Y_RNA.376-201ENST00000365638 108 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 Y_RNA.393-201ENST00000383936 102 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 SNORA72.4-201ENST00000384174 132 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 RNU6-662P-201ENST00000384253 104 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 Y_RNA.574-201ENST00000384766 95 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 SNORA26.5-201ENST00000391215 123 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 MIR1302-6-201ENST00000408466 90 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 RNU6-1203P-201ENST00000410703 110 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 RNU1-98P-201ENST00000458992 160 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 AC091959.1-201ENST00000495857 238 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 RNU6-1338P-201ENST00000516328 91 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 AC015688.6-201ENST00000577737 104 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 MIR151B-201ENST00000584249 96 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 AP003357.1-201ENST00000604497 148 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 PRR13P7-201ENST00000605538 430 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 AL365434.2-201ENST00000607979 234 ntBASIC1.67□□□□□ -2.14
USP38Q8NB14 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.67□□□□□ -2.14
USP38Q8NB14 RNU6-1084P-201ENST00000362498 107 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 Y_RNA.461-201ENST00000384263 103 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 RNU6-763P-201ENST00000390865 106 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 MIR4422-201ENST00000581938 83 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 AP001485.1-201ENST00000604799 199 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
USP38Q8NB14 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
USP38Q8NB14 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
USP38Q8NB14 MIR320A-201ENST00000385302 82 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 SNORA36B-201ENST00000410438 131 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 BTF3P11-201ENST00000426582 477 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 SNRPGP10-201ENST00000432323 225 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.65□□□□□ -2.15
USP38Q8NB14 SERF1AP1-201ENST00000514575 187 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 AL117187.1-201ENST00000555482 181 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 AC127455.1-201ENST00000565496 145 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 AC120024.3-201ENST00000603167 156 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 MIR6788-201ENST00000618842 66 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 U6.104-201ENST00000637979 90 ntBASIC1.65□□□□□ -2.15
USP38Q8NB14 Y_RNA.47-201ENST00000362697 108 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 Y_RNA.149-201ENST00000363558 117 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 Y_RNA.203-201ENST00000364106 102 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 Y_RNA.237-201ENST00000364439 102 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 MIR548J-201ENST00000408833 112 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 RPL30P13-201ENST00000418873 348 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 U8.19-201ENST00000459095 133 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.64□□□□□ -2.15
USP38Q8NB14 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 MIR6078-201ENST00000611069 100 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
USP38Q8NB14 MIR8062-201ENST00000621515 85 ntBASIC1.64□□□□□ -2.15
USP38Q8NB14 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.64□□□□□ -2.15
USP38Q8NB14 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
USP38Q8NB14 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
USP38Q8NB14 MIR302D-201ENST00000362275 68 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 SNORD33-201ENST00000362761 85 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 RNU6-899P-201ENST00000363947 107 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 RNU6-1065P-201ENST00000384513 106 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 RNU6-131P-201ENST00000391144 107 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 MIR548F4-201ENST00000408515 105 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 RN7SKP51-201ENST00000410781 304 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 SNX2P2-201ENST00000424553 323 ntBASIC1.63□□□□□ -2.15
USP38Q8NB14 AL118496.2-201ENST00000448300 230 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms