Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 AC120024.3-201ENST00000603167 156 ntBASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
PRPF38AQ8NAV1 SNORA20.1-201ENST00000364790 130 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 MIR522-201ENST00000385071 87 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 U8.16-201ENST00000391279 133 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 CALM2P4-201ENST00000430810 426 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 RPS29P11-201ENST00000496507 171 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 RNU7-12P-201ENST00000516030 62 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 AC084768.2-201ENST00000622736 221 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.11□□□□□ -2.07
PRPF38AQ8NAV1 MIR302D-201ENST00000362275 68 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-1084P-201ENST00000362498 107 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-1209P-201ENST00000363655 107 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 SNORD27-201ENST00000363981 72 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 snoU2-30.1-201ENST00000365012 70 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.307-201ENST00000365022 117 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.447-201ENST00000384184 113 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-163P-201ENST00000384396 106 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 MIR513A1-201ENST00000385138 129 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 MIR891A-201ENST00000401237 79 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 HMGN2P32-201ENST00000444648 269 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 SNORA25.15-201ENST00000516487 89 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-250P-201ENST00000516958 103 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 AL442067.1-201ENST00000613261 223 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.1□□□□□ -2.07
PRPF38AQ8NAV1 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 RNU6-833P-201ENST00000363486 107 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.796-201ENST00000364268 102 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 Y_RNA.799-201ENST00000364992 102 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 RPL23AP91-201ENST00000569211 455 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 MIR3128-201ENST00000581957 66 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
PRPF38AQ8NAV1 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.304-201ENST00000365011 112 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 RNA5SP190-201ENST00000365222 118 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.477-201ENST00000384352 108 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 MIR802-201ENST00000390235 94 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 RNU4-71P-201ENST00000516258 113 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.673-201ENST00000516306 88 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 AP000942.4-201ENST00000604811 241 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 MIR8081-201ENST00000611533 95 ntBASIC2.08□□□□□ -2.08
PRPF38AQ8NAV1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.188-201ENST00000363952 111 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.262-201ENST00000364641 102 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 RNA5SP259-201ENST00000365541 109 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 MT-TG-201ENST00000387429 68 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 SNORD58.1-201ENST00000391313 66 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 AL627390.1-201ENST00000396055 340 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 CBX3P4-201ENST00000538909 354 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 MIR4422-201ENST00000581938 83 ntBASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.07□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-199P-201ENST00000362954 107 ntBASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 SNORD14E-201ENST00000364009 85 ntBASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.336-201ENST00000365307 109 ntBASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 SUMO2P16-201ENST00000519475 264 ntBASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 MIR4255-201ENST00000579351 72 ntBASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PRPF38AQ8NAV1 SNORA16.1-201ENST00000364597 132 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.292-201ENST00000364904 97 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 SNORD1A-201ENST00000364968 72 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 MIR626-201ENST00000385032 94 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-651P-201ENST00000411040 105 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 RN7SKP101-201ENST00000411376 320 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 COX6CP14-201ENST00000469580 174 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 AC079140.2-201ENST00000506193 142 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 SNORD45.4-201ENST00000516629 73 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 AC019176.1-201ENST00000518519 225 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 AC100767.1-201ENST00000528178 123 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 MIR4778-201ENST00000577635 80 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 MIR4285-201ENST00000581001 85 ntBASIC2.05□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.60-201ENST00000362831 98 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 Y_RNA.65-201ENST00000362846 100 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-1065P-201ENST00000384513 106 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 MIR452-201ENST00000385020 85 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 SNORA17.3-201ENST00000391159 129 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-383P-201ENST00000410864 94 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 RPL31P63-201ENST00000422565 375 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 SNORD11-201ENST00000459124 84 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 SNORD13-201ENST00000459299 104 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 AC114811.1-201ENST00000507207 168 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 MTND1P19-201ENST00000511780 315 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 RNU6-126P-201ENST00000516685 103 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 MIR3122-201ENST00000577243 73 ntBASIC2.04□□□□□ -2.08
PRPF38AQ8NAV1 MIR4643-201ENST00000577473 78 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 171.8 ms