Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 RNU7-152P-201ENST00000458982 64 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 RNU6-830P-201ENST00000516353 107 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 RNU7-115P-201ENST00000516433 55 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 RNU7-116P-201ENST00000516940 62 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 AC006600.1-201ENST00000572529 153 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 MIR4251-201ENST00000635819 61 ntBASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CCDC65Q8IXS2 RNU6-1209P-201ENST00000363655 107 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 SNORD113.3-201ENST00000364630 78 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.462-201ENST00000384268 102 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 RNA5SP95-201ENST00000410319 137 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC244098.3-201ENST00000424803 96 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 HMGN1P10-201ENST00000474557 553 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.676-201ENST00000516393 96 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC127455.1-201ENST00000565496 145 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AL355375.2-201ENST00000574825 175 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC025627.3-201ENST00000582078 182 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC104985.2-201ENST00000620598 500 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 7SK.10-201ENST00000621414 298 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 AC068700.1-201ENST00000565862 3754 ntBASIC0.55□□□□□ -2.32
CCDC65Q8IXS2 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 RNU6-1115P-201ENST00000362490 106 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 RNU6-369P-201ENST00000362515 102 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 RNU6-268P-201ENST00000364174 107 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.331-201ENST00000365267 102 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 MIR570-201ENST00000384917 97 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 RNU6-613P-201ENST00000410412 108 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.714-201ENST00000517065 90 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 AC099654.14-201ENST00000638599 341 ntBASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.54□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.142-201ENST00000363491 102 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 SNORD18A-201ENST00000363753 72 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 SNORD14E-201ENST00000364009 85 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 Y_RNA.259-201ENST00000364619 101 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 RNU6-1283P-201ENST00000365314 105 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AL603910.2-201ENST00000407268 136 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 MIR1827-201ENST00000408549 66 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 RNU4-77P-201ENST00000516692 156 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 MIR3145-201ENST00000580727 82 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 MIR5188-201ENST00000583467 113 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AC008507.4-201ENST00000585464 127 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AL132765.2-201ENST00000610812 351 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 AC133104.2-201ENST00000615272 193 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.53□□□□□ -2.32
CCDC65Q8IXS2 MIR1278-201ENST00000408753 81 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 RNU2-14P-201ENST00000411053 191 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 RPL23AP54-201ENST00000495129 419 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 AC087685.1-201ENST00000587507 141 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 AL512605.2-201ENST00000592972 256 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 AL078603.1-201ENST00000603824 313 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 Pinc.1-201ENST00000616452 154 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 MIR548AY-201ENST00000617669 107 ntBASIC0.52□□□□□ -2.33
CCDC65Q8IXS2 RNU6-801P-201ENST00000364087 105 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 RNU4-50P-201ENST00000364361 141 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 U8.17-201ENST00000391292 132 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 AC114737.2-201ENST00000421583 173 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 RNU2-13P-201ENST00000515909 113 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 MIR548AO-201ENST00000579992 96 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 SNORD58B-201ENST00000607313 66 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.51□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.5-201ENST00000362334 102 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.187-201ENST00000363918 113 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 RNU6-1048P-201ENST00000364054 107 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 RNU6-580P-201ENST00000365159 107 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 RNU6-442P-201ENST00000383968 104 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.428-201ENST00000384078 102 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 SNORD63-201ENST00000384262 68 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 SNORD38C-201ENST00000384381 69 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.551-201ENST00000384661 102 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 SNORD72-201ENST00000390994 80 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 RNU6-229P-201ENST00000516614 102 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 SNORD116.3-201ENST00000517176 78 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 AC012433.1-201ENST00000588916 398 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.772-201ENST00000606692 102 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 AC007742.2-201ENST00000618226 398 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 MIR1302-1-201ENST00000637932 143 ntBASIC0.5□□□□□ -2.33
CCDC65Q8IXS2 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 Y_RNA.168-201ENST00000363740 102 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 RNU6-674P-201ENST00000363831 107 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 SNORD45.3-201ENST00000363836 72 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 RNU6-937P-201ENST00000384325 106 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 SNORA2B-201ENST00000384583 137 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 RNU6-1067P-201ENST00000384752 107 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
CCDC65Q8IXS2 RNU4-30P-201ENST00000410245 143 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 245.9 ms