Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 RNA5SP127-201ENST00000411051 133 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.629-201ENST00000411368 105 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 HMGN2P3-201ENST00000433603 273 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 HMGN2P5-201ENST00000436882 273 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.690-201ENST00000516603 95 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.757-201ENST00000578934 114 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 MIR8054-201ENST00000620877 86 ntBASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.43□□□□□ -2.02
TRIM48Q8IWZ4 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 MTND5P32-201ENST00000560711 1802 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-440P-201ENST00000390882 105 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 RNA5SP492-201ENST00000411330 114 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 SNRPGP13-201ENST00000442212 177 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 STAG3L5P-204ENST00000443759 179 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 AL365205.2-201ENST00000594586 68 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 AL391516.1-201ENST00000554380 2449 ntBASIC2.42□□□□□ -2.02
TRIM48Q8IWZ4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MIR6073-201ENST00000352083 89 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-888P-201ENST00000363010 101 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 Y_RNA.114-201ENST00000363265 113 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MIR548A2-201ENST00000384956 97 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MIR624-201ENST00000385217 97 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MIR1283-2-201ENST00000408621 87 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 AC008413.1-201ENST00000511864 177 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 SNORA31.10-201ENST00000516482 106 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 RNA5SP137-201ENST00000516833 135 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 RNU6-1116P-201ENST00000517269 99 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 MIR3121-201ENST00000579680 77 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 AC087685.1-201ENST00000587507 141 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 AC069114.2-201ENST00000604699 304 ntBASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.41□□□□□ -2.02
TRIM48Q8IWZ4 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.4□□□□□ -2.02
TRIM48Q8IWZ4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 SNORD14E-201ENST00000364009 85 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-1019P-201ENST00000364424 107 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.353-201ENST00000365440 108 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 SNORD24-201ENST00000383884 75 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 MIR518F-201ENST00000384973 87 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 SNORD77.3-201ENST00000391113 65 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 AF228730.3-201ENST00000436691 102 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 HSPE1P9-201ENST00000440046 311 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 RNVU1-2-201ENST00000516326 135 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 SNORD45.4-201ENST00000516629 73 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 AC090049.2-201ENST00000550377 109 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 MIR4762-201ENST00000585261 75 ntBASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
TRIM48Q8IWZ4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP482-201ENST00000391269 118 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 MIR891A-201ENST00000401237 79 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AL603914.1-201ENST00000401964 204 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AL359511.1-201ENST00000402970 211 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 MIR548O-201ENST00000408583 114 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AL158147.1-201ENST00000443970 75 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AC234781.5-201ENST00000508429 271 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP456-201ENST00000364002 114 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-268P-201ENST00000364174 107 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 U8.5-201ENST00000364528 136 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.273-201ENST00000364703 102 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 SNORA4.2-201ENST00000365313 147 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-442P-201ENST00000383968 104 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-301P-201ENST00000384277 107 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 AL158823.1-201ENST00000418441 478 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-1061P-201ENST00000516530 99 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNU7-25P-201ENST00000516544 62 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 RNA5SP402-201ENST00000517148 110 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 AL022345.2-201ENST00000606307 135 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 MIR376A2-201ENST00000636782 80 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 AL355596.1-201ENST00000565399 3996 ntBASIC2.38□□□□□ -2.03
TRIM48Q8IWZ4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 Y_RNA.81-201ENST00000362997 102 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 RNU1-109P-201ENST00000383960 147 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 SNORA80E-201ENST00000384744 137 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 HMGN2P39-201ENST00000398005 273 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 AC114811.1-201ENST00000507207 168 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 RNU6-772P-201ENST00000516042 105 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 AC133485.4-201ENST00000561835 220 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 AC138907.4-201ENST00000570107 226 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 SNORD14A-201ENST00000606526 91 ntBASIC2.37□□□□□ -2.03
TRIM48Q8IWZ4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms