Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC025253.1-201ENST00000613623 543 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 U6atac.1-201ENST00000616025 117 ntBASIC0.52□□□□□ -2.33
CCDC50Q8IVM0 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU6-710P-201ENST00000410424 105 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 AC099799.1-201ENST00000439809 192 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU6-277P-201ENST00000516272 106 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU7-115P-201ENST00000516433 55 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU7-181P-201ENST00000517234 74 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 VN1R91P-201ENST00000594377 169 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 AC084781.2-201ENST00000615568 161 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 MIR4272-201ENST00000635924 64 ntBASIC0.51□□□□□ -2.33
CCDC50Q8IVM0 RNU6-1048P-201ENST00000364054 107 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNU6-268P-201ENST00000364174 107 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.259-201ENST00000364619 101 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.456-201ENST00000384232 111 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 SNORD38C-201ENST00000384381 69 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 SNORD72-201ENST00000390994 80 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 MIR1827-201ENST00000408549 66 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNU4-30P-201ENST00000410245 143 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AC005534.2-201ENST00000431047 433 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 U8.19-201ENST00000459095 133 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 snoU13.21-201ENST00000459368 105 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNA5SP121-201ENST00000516537 101 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 RNU7-116P-201ENST00000516940 62 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AC127455.1-201ENST00000565496 145 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AL355375.2-201ENST00000574825 175 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 MIR548AO-201ENST00000579992 96 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AL355073.2-201ENST00000612106 557 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 JPX_2.1-201ENST00000614161 69 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 Pinc.1-201ENST00000616452 154 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 MIR6788-201ENST00000618842 66 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 AC104985.2-201ENST00000620598 500 ntBASIC0.5□□□□□ -2.33
CCDC50Q8IVM0 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 RNU6-1040P-201ENST00000383974 107 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.463-201ENST00000384271 102 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.496-201ENST00000384444 101 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 RNY4P36-201ENST00000391116 96 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 U8.17-201ENST00000391292 132 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 MTND1P14-201ENST00000427400 950 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.718-201ENST00000517110 102 ntBASIC0.49□□□□□ -2.33
CCDC50Q8IVM0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU6-369P-201ENST00000362515 102 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU6-442P-201ENST00000383968 104 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 SNORA36.2-201ENST00000384004 127 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 MTCO2P33-201ENST00000402100 465 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU6-613P-201ENST00000410412 108 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU2-14P-201ENST00000411053 191 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 AC015818.7-201ENST00000428754 109 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 AC098614.3-201ENST00000438957 440 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 AC087499.7-201ENST00000441958 109 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 RNU7-110P-201ENST00000516891 62 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 AC133104.2-201ENST00000615272 193 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 MIR548AY-201ENST00000617669 107 ntBASIC0.48□□□□□ -2.33
CCDC50Q8IVM0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.813-201ENST00000364639 102 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.387-201ENST00000383918 102 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.390-201ENST00000383932 102 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 Y_RNA.458-201ENST00000384240 102 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 RNU6-937P-201ENST00000384325 106 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AL603910.2-201ENST00000407268 136 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AC138393.2-201ENST00000414742 246 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 MIR2115-201ENST00000516657 100 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 SNORA20.3-201ENST00000516880 132 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 MIR5188-201ENST00000583467 113 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 MIR151B-201ENST00000584249 96 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AC008507.4-201ENST00000585464 127 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AC011373.1-201ENST00000607270 237 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AL136317.1-201ENST00000612653 226 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 AC010205.1-201ENST00000616668 449 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 MTND1P7-201ENST00000632801 297 ntBASIC0.47□□□□□ -2.33
CCDC50Q8IVM0 RNA5SP347-201ENST00000362445 119 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.80-201ENST00000362996 102 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 SNORD45.3-201ENST00000363836 72 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.224-201ENST00000364308 111 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.428-201ENST00000384078 102 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.485-201ENST00000384395 102 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 SNORA51.10-201ENST00000384418 136 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 MIR802-201ENST00000390235 94 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 RNU6-830P-201ENST00000516353 107 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 RPL23AP91-201ENST00000569211 455 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 MIR4791-201ENST00000607666 84 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 AC015726.2-201ENST00000620112 122 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 AC091925.1-201ENST00000623204 462 ntBASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.46□□□□□ -2.34
CCDC50Q8IVM0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.45□□□□□ -2.34
CCDC50Q8IVM0 Y_RNA.142-201ENST00000363491 102 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 330 ms