Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 MIR1265-201ENST00000408444 86 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 AC138207.3-201ENST00000585289 166 ntBASIC-2.2□□□□□ -2.76
LINC00643Q86TS7 RNU6-280P-201ENST00000364145 104 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 SNORD115-42-201ENST00000364273 82 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 RNU4-66P-201ENST00000365199 138 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 AC074085.1-201ENST00000413598 418 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 NDUFAF4P4-201ENST00000454883 502 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 RNU7-55P-201ENST00000459426 62 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 SNORA25.16-201ENST00000516741 121 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 DEFB131E-201ENST00000532329 154 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 AC109347.2-201ENST00000610220 349 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 U6.115-201ENST00000636045 103 ntBASIC-2.21□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.465-201ENST00000384293 102 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 RNU6-757P-201ENST00000410334 100 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 AC096949.1-201ENST00000412047 152 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 ELOCP4-201ENST00000420090 333 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 AC040926.1-201ENST00000530195 238 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 AC093023.1-201ENST00000547375 507 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 AL662814.1-201ENST00000617364 121 ntBASIC-2.22□□□□□ -2.76
LINC00643Q86TS7 Y_RNA.251-201ENST00000364551 99 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 SNORD24-201ENST00000383884 75 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 SNORD70.1-201ENST00000391007 85 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 AC005972.2-201ENST00000604690 348 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 AC005828.6-201ENST00000606610 232 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 MIR6779-201ENST00000617283 64 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 AL158209.2-201ENST00000619266 216 ntBASIC-2.23□□□□□ -2.77
LINC00643Q86TS7 SNORD114-7-201ENST00000362520 77 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 SNORD73A-201ENST00000386062 65 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 RNA5SP237-201ENST00000410414 113 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 AP001282.2-201ENST00000616149 309 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 AL354950.2-201ENST00000617939 290 ntBASIC-2.24□□□□□ -2.77
LINC00643Q86TS7 SNORD74.6-201ENST00000364796 70 ntBASIC-2.25□□□□□ -2.77
LINC00643Q86TS7 RNU6-1264P-201ENST00000383891 107 ntBASIC-2.25□□□□□ -2.77
LINC00643Q86TS7 Y_RNA.494-201ENST00000384432 111 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 MTND2P30-201ENST00000456663 382 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 RNU6-966P-201ENST00000516479 104 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 AC080013.3-201ENST00000606839 578 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 AC016911.1-201ENST00000613297 452 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 AC132825.6-201ENST00000638861 357 ntBASIC-2.26□□□□□ -2.77
LINC00643Q86TS7 Y_RNA.110-201ENST00000363220 99 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 FCF1P4-201ENST00000448326 183 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 RNU7-53P-201ENST00000516705 60 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 MTCO3P23-201ENST00000561363 289 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 MIR3941-201ENST00000582572 103 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 AL158050.2-201ENST00000605336 568 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 AC099654.12-201ENST00000639868 649 ntBASIC-2.27□□□□□ -2.77
LINC00643Q86TS7 RNU5B-4P-201ENST00000363508 111 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 RNU6-1317P-201ENST00000364582 104 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 Y_RNA.274-201ENST00000364714 101 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 RNU4-28P-201ENST00000364739 141 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 RNU6-159P-201ENST00000391080 106 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 RNU6-1337P-201ENST00000516525 95 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 RNU6-551P-201ENST00000516661 103 ntBASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-2.28□□□□□ -2.77
LINC00643Q86TS7 SNORD115-34-201ENST00000362441 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-12-201ENST00000362583 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-29-201ENST00000362834 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-9-201ENST00000362912 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-21-201ENST00000362963 81 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-14-201ENST00000363090 81 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-13-201ENST00000363358 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-41-201ENST00000363608 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-11-201ENST00000363616 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-5-201ENST00000363633 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-39-201ENST00000363694 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-4-201ENST00000363810 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-16-201ENST00000363887 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-6-201ENST00000363942 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-32-201ENST00000364079 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-15-201ENST00000364809 81 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-1-201ENST00000364961 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-26-201ENST00000365067 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-10-201ENST00000365073 81 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-43-201ENST00000365503 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-36-201ENST00000365629 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 UBL5P4-201ENST00000562584 236 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 AC008507.2-201ENST00000588402 1176 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 SNORD115-40-201ENST00000606510 82 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 AL121757.2-201ENST00000611223 313 ntBASIC-2.29□□□□□ -2.78
LINC00643Q86TS7 Y_RNA.118-201ENST00000363300 101 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 Y_RNA.241-201ENST00000364470 117 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 RNU1-141P-201ENST00000364623 158 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 MTND2P18-201ENST00000419962 1030 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 Y_RNA.659-201ENST00000515994 113 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 AP000942.4-201ENST00000604811 241 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 AL391262.2-201ENST00000622466 494 ntBASIC-2.3□□□□□ -2.78
LINC00643Q86TS7 AC006927.2-201ENST00000639256 389 ntBASIC-2.3□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 372.6 ms