Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RNU6-765P-201ENST00000516916 99 ntBASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 MIR6082-201ENST00000613604 109 ntBASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 MIR6086-201ENST00000638065 55 ntBASIC-1.65□□□□□ -2.67
CCDC58Q4VC31 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.471-201ENST00000384312 102 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 SNRPGP14-201ENST00000435400 219 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 AC010655.3-201ENST00000478818 450 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 SNORA19.3-201ENST00000516165 130 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 RNA5SP395-201ENST00000516567 118 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 MIR3115-201ENST00000577915 68 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 MIR3179-1-201ENST00000578940 84 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 MIR3179-2-201ENST00000579107 84 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 MIR3179-3-201ENST00000579566 84 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 MIR3179-4-201ENST00000617599 84 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 AP002371.2-201ENST00000624450 503 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 AC073869.9-201ENST00000641610 120 ntBASIC-1.66□□□□□ -2.68
CCDC58Q4VC31 SNORD115-2-201ENST00000362842 82 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 RNU6-442P-201ENST00000383968 104 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 SNORA24-201ENST00000384096 131 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.536-201ENST00000384621 113 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 UQCRBP2-201ENST00000447827 297 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 MTATP6P14-201ENST00000455189 673 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 CPDP1-201ENST00000579660 283 ntBASIC-1.67□□□□□ -2.68
CCDC58Q4VC31 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 RNA5SP261-201ENST00000410536 106 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 RNU6-325P-201ENST00000411132 105 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 HMGN1P33-201ENST00000432945 451 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 AC244505.6-201ENST00000452829 130 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 RPL30P10-201ENST00000488148 337 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 AC011352.1-201ENST00000512300 793 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 AL137161.1-201ENST00000532231 390 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 POLR3GP1-201ENST00000594073 261 ntBASIC-1.68□□□□□ -2.68
CCDC58Q4VC31 RNU6-108P-201ENST00000365558 107 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 MIR1-2-201ENST00000384961 85 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 MIR517B-201ENST00000385102 67 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 SNORD110-201ENST00000408189 75 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 RPL30P16-201ENST00000419341 429 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 RNA5SP67-201ENST00000516422 131 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 RNA5SP33-201ENST00000516687 98 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 Z97988.1-201ENST00000637697 135 ntBASIC-1.69□□□□□ -2.68
CCDC58Q4VC31 RNU6-431P-201ENST00000383874 107 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 RNU6-926P-201ENST00000384075 107 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 RNU6-535P-201ENST00000384722 107 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 SNORD64-201ENST00000386683 67 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 MTCO2P21-201ENST00000419780 677 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 RNU2-11P-201ENST00000459191 187 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 RNU7-188P-201ENST00000517063 64 ntBASIC-1.7□□□□□ -2.68
CCDC58Q4VC31 SNORD50.1-201ENST00000362987 71 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.295-201ENST00000364918 102 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 RNU2-29P-201ENST00000410423 189 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 AC006210.1-201ENST00000424882 111 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 MTCO3P38-201ENST00000468910 766 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 AC022878.1-201ENST00000530684 149 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 AP003072.1-201ENST00000531740 145 ntBASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.71□□□□□ -2.68
CCDC58Q4VC31 RNU6-268P-201ENST00000364174 107 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 AL133255.1-201ENST00000606374 441 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 AL158063.1-201ENST00000615349 536 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 AL607023.1-201ENST00000620045 248 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 MIR382-201ENST00000637119 76 ntBASIC-1.72□□□□□ -2.68
CCDC58Q4VC31 SNORD115-41-201ENST00000363608 82 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 RNU6-501P-201ENST00000364072 100 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 RNU6-901P-201ENST00000384593 106 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.571-201ENST00000384753 98 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 RNU6-706P-201ENST00000517229 104 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 RNY1P9-201ENST00000532431 109 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 MTND1P24-201ENST00000552175 861 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 MIR5583-1-201ENST00000580941 59 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 AC006566.1-201ENST00000608943 513 ntBASIC-1.73□□□□□ -2.69
CCDC58Q4VC31 RNU6-403P-201ENST00000363163 104 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 RNU4-92P-201ENST00000363783 136 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 RNU4-66P-201ENST00000365199 138 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.374-201ENST00000365606 101 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 RNU6-708P-201ENST00000384217 107 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 RNU6-933P-201ENST00000384424 107 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 MIR518B-201ENST00000385127 83 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 RNA5SP475-201ENST00000410568 110 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 MTATP6P18-201ENST00000417994 673 ntBASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-1.74□□□□□ -2.69
CCDC58Q4VC31 AC093023.1-201ENST00000547375 507 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 189.8 ms