Protein–RNA interactions for Protein: Q15651

HMGN3, High mobility group nucleosome-binding domain-containing protein 3, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3Q15651 AP003181.2-201ENST00000528941 181 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 AC005972.2-201ENST00000604690 348 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 AC006386.1-201ENST00000619436 415 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 U6.115-201ENST00000636045 103 ntBASIC-1.8□□□□□ -2.7
HMGN3Q15651 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 RNU6-865P-201ENST00000364772 107 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 RNU6-900P-201ENST00000384498 102 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 RPL30P10-201ENST00000488148 337 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 AC116353.3-201ENST00000511215 249 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 SNORD22.1-201ENST00000516331 125 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 MTND5P17-201ENST00000418405 1603 ntBASIC-1.81□□□□□ -2.7
HMGN3Q15651 SNORA20.2-201ENST00000383922 131 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 MIR181B2-201ENST00000385004 89 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-1.82□□□□□ -2.7
HMGN3Q15651 Y_RNA.659-201ENST00000515994 113 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 SNORA25.16-201ENST00000516741 121 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 RNU6-175P-201ENST00000516896 107 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 RNY1P9-201ENST00000532431 109 ntBASIC-1.82□□□□□ -2.7
HMGN3Q15651 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.83□□□□□ -2.7
HMGN3Q15651 RNU6-509P-201ENST00000363519 107 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 RNU6-280P-201ENST00000364145 104 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 AP000533.3-201ENST00000447704 118 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 RNU6-1332P-201ENST00000516666 104 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.83□□□□□ -2.7
HMGN3Q15651 AP000676.1-201ENST00000533307 52 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.83□□□□□ -2.7
HMGN3Q15651 MIR409-201ENST00000362237 79 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 Y_RNA.142-201ENST00000363491 102 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 SNORD64-201ENST00000386683 67 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 MT-TY-201ENST00000387409 66 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 USP9YP16-201ENST00000430287 407 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 HAR1A.1-201ENST00000459583 118 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.84□□□□□ -2.7
HMGN3Q15651 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 AC022616.4-201ENST00000522985 181 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 AC073648.5-201ENST00000603502 305 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 AL360085.1-201ENST00000604713 532 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 AC099654.12-201ENST00000639868 649 ntBASIC-1.84□□□□□ -2.7
HMGN3Q15651 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 SNORD115-41-201ENST00000363608 82 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 SNORD114-29-201ENST00000364819 70 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 RNU6-541P-201ENST00000384709 110 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 MRPL42P2-201ENST00000403169 426 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 RPL30P16-201ENST00000419341 429 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 USP9YP30-201ENST00000430729 455 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 Z82188.1-201ENST00000436709 154 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.85□□□□□ -2.71
HMGN3Q15651 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.85□□□□□ -2.71
HMGN3Q15651 MTCO3P23-201ENST00000561363 289 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 AC013244.3-201ENST00000605614 388 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 AC080013.3-201ENST00000606839 578 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 AC109347.2-201ENST00000610220 349 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 AC009248.2-201ENST00000619826 254 ntBASIC-1.85□□□□□ -2.71
HMGN3Q15651 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 RNU5F-3P-201ENST00000363767 117 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 MIR539-201ENST00000365690 78 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 RNU6-159P-201ENST00000391080 106 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 AC096949.1-201ENST00000412047 152 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-1.86□□□□□ -2.71
HMGN3Q15651 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.86□□□□□ -2.71
HMGN3Q15651 snoU13.13-201ENST00000458842 104 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 RNA5SP33-201ENST00000516687 98 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 MIR4306-201ENST00000583390 91 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 AC005828.6-201ENST00000606610 232 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 AP001282.2-201ENST00000616149 309 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 AL662814.1-201ENST00000617364 121 ntBASIC-1.86□□□□□ -2.71
HMGN3Q15651 RNU6-413P-201ENST00000384115 107 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 MIR521-1-201ENST00000384902 87 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 RNA5SP237-201ENST00000410414 113 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 RNU2-29P-201ENST00000410423 189 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC-1.87□□□□□ -2.71
HMGN3Q15651 MTND2P18-201ENST00000419962 1030 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 MTND4LP18-201ENST00000526864 291 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 DEFB131E-201ENST00000532329 154 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.87□□□□□ -2.71
HMGN3Q15651 AC064836.2-201ENST00000609491 462 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 uc_338.10-201ENST00000621872 182 ntBASIC-1.87□□□□□ -2.71
HMGN3Q15651 RNY1P12-201ENST00000364251 105 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 RNU6-431P-201ENST00000383874 107 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.88□□□□□ -2.71
HMGN3Q15651 USP9YP12-201ENST00000450481 570 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 RNU7-138P-201ENST00000459479 64 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-1.88□□□□□ -2.71
HMGN3Q15651 AC112204.1-201ENST00000502591 103 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 AC105417.1-201ENST00000514691 285 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 AL512506.1-201ENST00000613918 449 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 AL391262.2-201ENST00000622466 494 ntBASIC-1.88□□□□□ -2.71
HMGN3Q15651 RNA5SP403-201ENST00000363598 108 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 RNA5SP192-201ENST00000364404 120 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 Y_RNA.241-201ENST00000364470 117 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 RNU6-1029P-201ENST00000384109 107 ntBASIC-1.89□□□□□ -2.71
HMGN3Q15651 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms