Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 UBL5P4-201ENST00000562584 236 ntBASIC-1.38□□□□□ -2.63
CPSF1Q10570 MIR4306-201ENST00000583390 91 ntBASIC-1.38□□□□□ -2.63
CPSF1Q10570 MIR8055-201ENST00000610739 97 ntBASIC-1.38□□□□□ -2.63
CPSF1Q10570 AC072046.2-201ENST00000618366 268 ntBASIC-1.38□□□□□ -2.63
CPSF1Q10570 AL163152.1-201ENST00000642001 374 ntBASIC-1.38□□□□□ -2.63
CPSF1Q10570 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU6-442P-201ENST00000383968 104 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU6-74P-201ENST00000384235 107 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 MTATP6P14-201ENST00000455189 673 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU2-11P-201ENST00000459191 187 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 PIGPP4-201ENST00000584447 307 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 AC005828.6-201ENST00000606610 232 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU6-1192P-201ENST00000612197 107 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU6-489P-201ENST00000618289 107 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 AP002371.2-201ENST00000624450 503 ntBASIC-1.39□□□□□ -2.63
CPSF1Q10570 RNU6-403P-201ENST00000363163 104 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 RNU6-606P-201ENST00000384721 111 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 MIR516B1-201ENST00000385211 90 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 MTCO3P38-201ENST00000468910 766 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 HSPE1P23-201ENST00000509838 286 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 SNORD27.1-201ENST00000516319 72 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 AL133173.2-201ENST00000614270 90 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.4□□□□□ -2.63
CPSF1Q10570 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 SNORA24-201ENST00000384096 131 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 MIR521-1-201ENST00000384902 87 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 AL590002.1-201ENST00000406554 418 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 SNRPGP14-201ENST00000435400 219 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 AC011352.1-201ENST00000512300 793 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.4□□□□□ -2.63
CPSF1Q10570 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.4□□□□□ -2.63
CPSF1Q10570 Z97988.1-201ENST00000637697 135 ntBASIC-1.4□□□□□ -2.63
CPSF1Q10570 RNU6-1264P-201ENST00000383891 107 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 Y_RNA.484-201ENST00000384389 103 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 Y_RNA.517-201ENST00000384551 106 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 MTATP6P20-201ENST00000414147 562 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 ERLEC1P1-201ENST00000433806 578 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 RNA5SP461-201ENST00000516451 104 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 Y_RNA.683-201ENST00000516508 93 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.41□□□□□ -2.64
CPSF1Q10570 CPDP1-201ENST00000579660 283 ntBASIC-1.41□□□□□ -2.64
CPSF1Q10570 RNU6-490P-201ENST00000362985 107 ntBASIC-1.42□□□□□ -2.64
CPSF1Q10570 RNU6-268P-201ENST00000364174 107 ntBASIC-1.42□□□□□ -2.64
CPSF1Q10570 Z82188.1-201ENST00000436709 154 ntBASIC-1.42□□□□□ -2.64
CPSF1Q10570 RNU7-67P-201ENST00000459003 62 ntBASIC-1.42□□□□□ -2.64
CPSF1Q10570 AL133255.1-201ENST00000606374 441 ntBASIC-1.42□□□□□ -2.64
CPSF1Q10570 SNORD110-201ENST00000408189 75 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 GPR143P-201ENST00000434155 205 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 AC104850.1-201ENST00000435940 476 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 RPL39P25-201ENST00000449384 154 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-1.43□□□□□ -2.64
CPSF1Q10570 Vault.3-201ENST00000516676 95 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 RNU6-706P-201ENST00000517229 104 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 CLPTM1LP1-201ENST00000604519 484 ntBASIC-1.43□□□□□ -2.64
CPSF1Q10570 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-931P-201ENST00000363850 107 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 SNORD114-3-201ENST00000364969 75 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-1329P-201ENST00000365664 107 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-926P-201ENST00000384075 107 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-708P-201ENST00000384217 107 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-602P-201ENST00000411155 105 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 MTATP6P18-201ENST00000417994 673 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RPL30P16-201ENST00000419341 429 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.44□□□□□ -2.64
CPSF1Q10570 SNORA25.13-201ENST00000516395 103 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 AP003072.1-201ENST00000531740 145 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 MTND1P24-201ENST00000552175 861 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 AC090616.2-202ENST00000584248 222 ntBASIC-1.44□□□□□ -2.64
CPSF1Q10570 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 Y_RNA.288-201ENST00000364854 92 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 Y_RNA.539-201ENST00000384635 107 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.45□□□□□ -2.64
CPSF1Q10570 BX276092.1-201ENST00000427368 251 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.45□□□□□ -2.64
CPSF1Q10570 RPL30P10-201ENST00000488148 337 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 RNU6-958P-201ENST00000516995 106 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 AC104576.1-201ENST00000524225 88 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 AC140658.3-201ENST00000567603 271 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 MTND5P34-201ENST00000568888 325 ntBASIC-1.45□□□□□ -2.64
CPSF1Q10570 AL589826.1-201ENST00000340697 249 ntBASIC-1.46□□□□□ -2.64
CPSF1Q10570 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-1.46□□□□□ -2.64
CPSF1Q10570 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.46□□□□□ -2.64
CPSF1Q10570 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.46□□□□□ -2.64
CPSF1Q10570 MTATP6P25-201ENST00000574491 261 ntBASIC-1.46□□□□□ -2.64
CPSF1Q10570 AL158063.1-201ENST00000615349 536 ntBASIC-1.46□□□□□ -2.64
CPSF1Q10570 AL596211.1-201ENST00000569873 2277 ntBASIC-1.46□□□□□ -2.64
CPSF1Q10570 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.47□□□□□ -2.64
CPSF1Q10570 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 SNORD50.1-201ENST00000362987 71 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 MIR1-2-201ENST00000384961 85 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 SNORD12C-201ENST00000386307 89 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 RNU2-29P-201ENST00000410423 189 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 RNU6-325P-201ENST00000411132 105 ntBASIC-1.47□□□□□ -2.64
CPSF1Q10570 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.47□□□□□ -2.64
CPSF1Q10570 SCARNA18B-201ENST00000458806 135 ntBASIC-1.47□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms