Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.32□□□□□ -2.2
CDK3Q00526 AC091959.1-201ENST00000495857 238 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 RNU6-322P-201ENST00000516010 103 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 RNA5SP61-201ENST00000516453 100 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 RNU6-635P-201ENST00000516651 102 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 RN7SKP88-201ENST00000516847 250 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 Y_RNA.714-201ENST00000517065 90 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 AC005357.1-201ENST00000588399 301 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 7SK.8-201ENST00000612110 250 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 7SK.11-201ENST00000615477 250 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 AL353770.2-201ENST00000620024 78 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 7SK.13-201ENST00000622040 250 ntBASIC1.32□□□□□ -2.2
CDK3Q00526 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
CDK3Q00526 RNU6-899P-201ENST00000363947 107 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 RNU6-437P-201ENST00000459408 95 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 AC004223.1-201ENST00000479840 271 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 AC005840.1-201ENST00000498412 377 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 SNORD45.4-201ENST00000516629 73 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 FAM106DP-201ENST00000586416 501 ntBASIC1.31□□□□□ -2.2
CDK3Q00526 RNU6-238P-201ENST00000363313 106 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 RNU6-1209P-201ENST00000363655 107 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 snoU2-30.1-201ENST00000365012 70 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 Y_RNA.327-201ENST00000365201 102 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 RNU6-662P-201ENST00000384253 104 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 Y_RNA.512-201ENST00000384518 102 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 MIR526A1-201ENST00000384897 85 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 MIR1278-201ENST00000408753 81 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 RNU6-1203P-201ENST00000410703 110 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.3□□□□□ -2.2
CDK3Q00526 SCARNA24.2-201ENST00000516968 130 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 MIR3660-201ENST00000584845 100 ntBASIC1.3□□□□□ -2.2
CDK3Q00526 RNU6-1272P-201ENST00000362776 107 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 RNU6-1205P-201ENST00000363625 106 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 Y_RNA.796-201ENST00000364268 102 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 SNORA63C-201ENST00000364578 129 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 Y_RNA.799-201ENST00000364992 102 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 SNORD50B-201ENST00000364995 70 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 MIR1298-201ENST00000408783 112 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 Y_RNA.637-201ENST00000459424 114 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 TRMT112P2-201ENST00000512910 132 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 SERF1AP1-201ENST00000514575 187 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 RNU6-1338P-201ENST00000516328 91 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 DEFB108E-201ENST00000524692 240 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 MIR2681-201ENST00000581814 105 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 AC008737.2-201ENST00000599446 118 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 GHRLOS.1-201ENST00000610995 70 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 MIR8065-201ENST00000620577 100 ntBASIC1.29□□□□□ -2.2
CDK3Q00526 Y_RNA.145-201ENST00000363527 102 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 RNU6-674P-201ENST00000363831 107 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 BTF3P11-201ENST00000426582 477 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 TRBVB-201ENST00000477100 408 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 RNU6-947P-201ENST00000516264 106 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 SNORA27.4-201ENST00000516650 95 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 RPL23AP91-201ENST00000569211 455 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 AC013791.1-201ENST00000616619 62 ntBASIC1.28□□□□□ -2.2
CDK3Q00526 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.27□□□□□ -2.21
CDK3Q00526 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CDK3Q00526 Y_RNA.4-201ENST00000362333 112 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 SNORD14E-201ENST00000364009 85 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 Y_RNA.376-201ENST00000365638 108 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 RNU6-969P-201ENST00000383900 105 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 MIR516B2-201ENST00000385190 85 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 MIR758-201ENST00000390227 88 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 HMGN2P32-201ENST00000444648 269 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.27□□□□□ -2.21
CDK3Q00526 RNU6-165P-201ENST00000517170 99 ntBASIC1.27□□□□□ -2.21
CDK3Q00526 AL161722.3-201ENST00000605789 2983 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 RNY1P10-201ENST00000363268 113 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 RNU6-392P-201ENST00000364926 101 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 Y_RNA.336-201ENST00000365307 109 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 RNU6-144P-201ENST00000383951 107 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 SNORD26-201ENST00000384147 75 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 Y_RNA.459-201ENST00000384251 102 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 RNU6-738P-201ENST00000384531 106 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 MIR802-201ENST00000390235 94 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.26□□□□□ -2.21
CDK3Q00526 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 AL357312.1-201ENST00000603879 298 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 AC007742.2-201ENST00000618226 398 ntBASIC1.26□□□□□ -2.21
CDK3Q00526 Y_RNA.217-201ENST00000364214 105 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 Y_RNA.574-201ENST00000384766 95 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 MIR548F4-201ENST00000408515 105 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 RPS29P29-201ENST00000456396 171 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 Y_RNA.641-201ENST00000459414 105 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 NDUFA4P2-201ENST00000489989 244 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 AC068338.1-201ENST00000565567 176 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 MIR5692C2-201ENST00000577959 77 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 MIR4781-201ENST00000585250 76 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 AC087685.1-201ENST00000587507 141 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 MIR7974-201ENST00000615835 79 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 AP001282.2-201ENST00000616149 309 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 snoU18.1-201ENST00000629629 71 ntBASIC1.25□□□□□ -2.21
CDK3Q00526 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CDK3Q00526 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
CDK3Q00526 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms