Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 MIR568-201ENST00000385036 95 ntBASIC1.4□□□□□ -2.19
RPS3AP61247 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
RPS3AP61247 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.4□□□□□ -2.19
RPS3AP61247 HMGN2P32-201ENST00000444648 269 ntBASIC1.4□□□□□ -2.19
RPS3AP61247 MIR2681-201ENST00000581814 105 ntBASIC1.4□□□□□ -2.19
RPS3AP61247 JPX_2.1-201ENST00000614161 69 ntBASIC1.4□□□□□ -2.19
RPS3AP61247 AC134026.1-201ENST00000623249 2239 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RPS3AP61247 RNA5SP432-201ENST00000362480 116 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 Y_RNA.47-201ENST00000362697 108 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 RNU6-674P-201ENST00000363831 107 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 Y_RNA.518-201ENST00000384552 113 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 RNU6-763P-201ENST00000390865 106 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 SNORA36B-201ENST00000410438 131 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 AL118496.2-201ENST00000448300 230 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 RNU6-437P-201ENST00000459408 95 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 Y_RNA.637-201ENST00000459424 114 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 TRBVB-201ENST00000477100 408 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 SERF1AP1-201ENST00000514575 187 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 SCARNA24.2-201ENST00000516968 130 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 RNU6-165P-201ENST00000517170 99 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 SNORA31.24-201ENST00000517232 57 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 DEFB108E-201ENST00000524692 240 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 FAM106DP-201ENST00000586416 501 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 AC087685.1-201ENST00000587507 141 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 AL512605.2-201ENST00000592972 256 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 AP000942.3-201ENST00000603702 160 ntBASIC1.39□□□□□ -2.19
RPS3AP61247 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPS3AP61247 RNU6-1272P-201ENST00000362776 107 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 RNU6-899P-201ENST00000363947 107 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 Y_RNA.217-201ENST00000364214 105 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 Y_RNA.237-201ENST00000364439 102 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 RNU6-60P-201ENST00000364792 103 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 RNU6-514P-201ENST00000384208 107 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 RNU6-662P-201ENST00000384253 104 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 Y_RNA.461-201ENST00000384263 103 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 RNU6-713P-201ENST00000384761 107 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 MIR526A1-201ENST00000384897 85 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.38□□□□□ -2.19
RPS3AP61247 Y_RNA.641-201ENST00000459414 105 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 AC005357.1-201ENST00000588399 301 ntBASIC1.38□□□□□ -2.19
RPS3AP61247 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.38□□□□□ -2.19
RPS3AP61247 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
RPS3AP61247 SNORA25.1-201ENST00000362326 128 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 Y_RNA.336-201ENST00000365307 109 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 MIR1304-201ENST00000408243 91 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 RNU6-1045P-201ENST00000516321 107 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 AL512598.1-201ENST00000610158 273 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 AL008718.3-201ENST00000610217 321 ntBASIC1.37□□□□□ -2.19
RPS3AP61247 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
RPS3AP61247 RNU6-1209P-201ENST00000363655 107 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 RNU1-42P-201ENST00000364033 160 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 MTCO2P33-201ENST00000402100 465 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 AC108667.1-201ENST00000428618 249 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 MTCYBP9-201ENST00000431021 303 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 RPL39P39-201ENST00000455840 151 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 MTCO2P24-201ENST00000515611 426 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.36□□□□□ -2.19
RPS3AP61247 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.36□□□□□ -2.19
RPS3AP61247 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RPS3AP61247 UBE2WP1-201ENST00000362030 340 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 Y_RNA.176-201ENST00000363815 109 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 Y_RNA.796-201ENST00000364268 102 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 Y_RNA.799-201ENST00000364992 102 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 SNORD50B-201ENST00000364995 70 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 RNU6-144P-201ENST00000383951 107 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 MIR15B-201ENST00000385045 98 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 MIR136-201ENST00000385207 82 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.35□□□□□ -2.19
RPS3AP61247 SNORA27.4-201ENST00000516650 95 ntBASIC1.35□□□□□ -2.19
RPS3AP61247 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.35□□□□□ -2.19
RPS3AP61247 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
RPS3AP61247 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.35□□□□□ -2.19
RPS3AP61247 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
RPS3AP61247 MIR378A-201ENST00000362177 66 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 Y_RNA.117-201ENST00000363294 101 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 Y_RNA.149-201ENST00000363558 117 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 SNORD14E-201ENST00000364009 85 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 Y_RNA.275-201ENST00000364726 110 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 MIR1278-201ENST00000408753 81 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 RNU6-651P-201ENST00000411040 105 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 RNU6-1054P-201ENST00000411293 104 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 BTF3P11-201ENST00000426582 477 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS3AP61247 RNU6-1007P-201ENST00000516586 107 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 RNU1-92P-201ENST00000517017 135 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.34□□□□□ -2.19
RPS3AP61247 MIR4303-201ENST00000581299 66 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
RPS3AP61247 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.34□□□□□ -2.19
RPS3AP61247 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.33□□□□□ -2.2
RPS3AP61247 AL391987.6-201ENST00000305671 199 ntBASIC1.33□□□□□ -2.2
RPS3AP61247 RNA5SP327-201ENST00000362494 101 ntBASIC1.33□□□□□ -2.2
RPS3AP61247 RNU6-1205P-201ENST00000363625 106 ntBASIC1.33□□□□□ -2.2
RPS3AP61247 SNORA17.3-201ENST00000391159 129 ntBASIC1.33□□□□□ -2.2
RPS3AP61247 MIR1302-6-201ENST00000408466 90 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms