Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORA40.14-201ENST00000516543 86 ntBASIC0.75□□□□□ -2.29
SRP54P61011 Y_RNA.713-201ENST00000517013 96 ntBASIC0.75□□□□□ -2.29
SRP54P61011 DEFB108E-201ENST00000524692 240 ntBASIC0.75□□□□□ -2.29
SRP54P61011 AC024405.2-202ENST00000532731 184 ntBASIC0.75□□□□□ -2.29
SRP54P61011 AC127455.1-201ENST00000565496 145 ntBASIC0.75□□□□□ -2.29
SRP54P61011 RPS29P30-201ENST00000600975 111 ntBASIC0.75□□□□□ -2.29
SRP54P61011 DEFB117-201ENST00000602356 141 ntBASIC0.75□□□□□ -2.29
SRP54P61011 AL353765.1-201ENST00000605514 183 ntBASIC0.75□□□□□ -2.29
SRP54P61011 AC011373.1-201ENST00000607270 237 ntBASIC0.75□□□□□ -2.29
SRP54P61011 MIR6835-201ENST00000621552 64 ntBASIC0.75□□□□□ -2.29
SRP54P61011 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.75□□□□□ -2.29
SRP54P61011 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
SRP54P61011 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.74□□□□□ -2.29
SRP54P61011 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.74□□□□□ -2.29
SRP54P61011 SNORD81.1-201ENST00000363064 77 ntBASIC0.74□□□□□ -2.29
SRP54P61011 Y_RNA.370-201ENST00000365589 108 ntBASIC0.74□□□□□ -2.29
SRP54P61011 Y_RNA.526-201ENST00000384572 110 ntBASIC0.74□□□□□ -2.29
SRP54P61011 MIR100-201ENST00000385259 80 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AL590004.1-201ENST00000405321 300 ntBASIC0.74□□□□□ -2.29
SRP54P61011 Y_RNA.632-201ENST00000459189 102 ntBASIC0.74□□□□□ -2.29
SRP54P61011 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
SRP54P61011 SNORD19B-201ENST00000459623 84 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AC082651.2-201ENST00000496833 166 ntBASIC0.74□□□□□ -2.29
SRP54P61011 RNU7-115P-201ENST00000516433 55 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AC023827.1-201ENST00000569247 97 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AL355375.2-201ENST00000574825 175 ntBASIC0.74□□□□□ -2.29
SRP54P61011 MIR5188-201ENST00000583467 113 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AC092447.9-201ENST00000603395 144 ntBASIC0.74□□□□□ -2.29
SRP54P61011 AC008133.2-201ENST00000624540 351 ntBASIC0.74□□□□□ -2.29
SRP54P61011 HSBP1P2-201ENST00000299671 229 ntBASIC0.73□□□□□ -2.29
SRP54P61011 SNORA72.1-201ENST00000363485 129 ntBASIC0.73□□□□□ -2.29
SRP54P61011 Y_RNA.252-201ENST00000364556 101 ntBASIC0.73□□□□□ -2.29
SRP54P61011 RNU6-442P-201ENST00000383968 104 ntBASIC0.73□□□□□ -2.29
SRP54P61011 Y_RNA.458-201ENST00000384240 102 ntBASIC0.73□□□□□ -2.29
SRP54P61011 SNORD63-201ENST00000384262 68 ntBASIC0.73□□□□□ -2.29
SRP54P61011 Y_RNA.496-201ENST00000384444 101 ntBASIC0.73□□□□□ -2.29
SRP54P61011 MIR605-201ENST00000385078 83 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AF228730.4-201ENST00000421457 183 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AL035398.1-201ENST00000430869 322 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.73□□□□□ -2.29
SRP54P61011 RPL23AP54-201ENST00000495129 419 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.73□□□□□ -2.29
SRP54P61011 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.73□□□□□ -2.29
SRP54P61011 RNU6-830P-201ENST00000516353 107 ntBASIC0.73□□□□□ -2.29
SRP54P61011 RNU7-110P-201ENST00000516891 62 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
SRP54P61011 MIR4714-201ENST00000580728 77 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC025627.3-201ENST00000582078 182 ntBASIC0.73□□□□□ -2.29
SRP54P61011 MIR548AY-201ENST00000617669 107 ntBASIC0.73□□□□□ -2.29
SRP54P61011 AC134026.1-201ENST00000623249 2239 ntBASIC0.73□□□□□ -2.29
SRP54P61011 Y_RNA.551-201ENST00000384661 102 ntBASIC0.72□□□□□ -2.29
SRP54P61011 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.72□□□□□ -2.29
SRP54P61011 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.72□□□□□ -2.29
SRP54P61011 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.72□□□□□ -2.29
SRP54P61011 AL160004.2-201ENST00000432935 350 ntBASIC0.72□□□□□ -2.29
SRP54P61011 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.72□□□□□ -2.29
SRP54P61011 HMGN1P10-201ENST00000474557 553 ntBASIC0.72□□□□□ -2.29
SRP54P61011 AC113410.1-201ENST00000505029 247 ntBASIC0.72□□□□□ -2.29
SRP54P61011 RNA5SP436-201ENST00000516020 115 ntBASIC0.72□□□□□ -2.29
SRP54P61011 RNU6-976P-201ENST00000516086 111 ntBASIC0.72□□□□□ -2.29
SRP54P61011 RNU4-77P-201ENST00000516692 156 ntBASIC0.72□□□□□ -2.29
SRP54P61011 MIR2681-201ENST00000581814 105 ntBASIC0.72□□□□□ -2.29
SRP54P61011 AC104465.1-201ENST00000611365 139 ntBASIC0.72□□□□□ -2.29
SRP54P61011 AL606534.2-204ENST00000635008 178 ntBASIC0.72□□□□□ -2.29
SRP54P61011 MIR4251-201ENST00000635819 61 ntBASIC0.72□□□□□ -2.29
SRP54P61011 U8.7-201ENST00000364940 136 ntBASIC0.71□□□□□ -2.3
SRP54P61011 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
SRP54P61011 MIR508-201ENST00000384857 115 ntBASIC0.71□□□□□ -2.3
SRP54P61011 MIR802-201ENST00000390235 94 ntBASIC0.71□□□□□ -2.3
SRP54P61011 AC236972.2-201ENST00000434979 310 ntBASIC0.71□□□□□ -2.3
SRP54P61011 AL392103.1-201ENST00000447000 198 ntBASIC0.71□□□□□ -2.3
SRP54P61011 RNU6-1110P-201ENST00000516462 101 ntBASIC0.71□□□□□ -2.3
SRP54P61011 RNU6-1209P-201ENST00000363655 107 ntBASIC0.7□□□□□ -2.3
SRP54P61011 Y_RNA.242-201ENST00000364473 110 ntBASIC0.7□□□□□ -2.3
SRP54P61011 RNU1-133P-201ENST00000364867 167 ntBASIC0.7□□□□□ -2.3
SRP54P61011 Y_RNA.439-201ENST00000384119 94 ntBASIC0.7□□□□□ -2.3
SRP54P61011 RNU6-21P-201ENST00000384710 107 ntBASIC0.7□□□□□ -2.3
SRP54P61011 MIR598-201ENST00000384868 97 ntBASIC0.7□□□□□ -2.3
SRP54P61011 SNORD111-201ENST00000408139 94 ntBASIC0.7□□□□□ -2.3
SRP54P61011 SNRPGP14-201ENST00000435400 219 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AC067940.1-201ENST00000458411 300 ntBASIC0.7□□□□□ -2.3
SRP54P61011 U8.20-201ENST00000459445 131 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AC117454.1-201ENST00000491120 168 ntBASIC0.7□□□□□ -2.3
SRP54P61011 Y_RNA.661-201ENST00000516003 99 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AC036111.3-201ENST00000526389 112 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.7□□□□□ -2.3
SRP54P61011 AC093027.1-201ENST00000546698 429 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AL590095.2-201ENST00000604136 117 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AL136317.1-201ENST00000612653 226 ntBASIC0.7□□□□□ -2.3
SRP54P61011 AC104985.2-201ENST00000620598 500 ntBASIC0.7□□□□□ -2.3
SRP54P61011 RNU6-1067P-201ENST00000384752 107 ntBASIC0.69□□□□□ -2.3
SRP54P61011 MIR1302-7-201ENST00000408841 72 ntBASIC0.69□□□□□ -2.3
SRP54P61011 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
SRP54P61011 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.69□□□□□ -2.3
SRP54P61011 NDUFA4P2-201ENST00000489989 244 ntBASIC0.69□□□□□ -2.3
SRP54P61011 RNU6-1007P-201ENST00000516586 107 ntBASIC0.69□□□□□ -2.3
SRP54P61011 MIR548AR-201ENST00000582191 57 ntBASIC0.69□□□□□ -2.3
SRP54P61011 AL080274.1-201ENST00000605565 220 ntBASIC0.69□□□□□ -2.3
SRP54P61011 Pinc.1-201ENST00000616452 154 ntBASIC0.69□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms