Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 RNA5SP432-201ENST00000362480 116 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.52-201ENST00000362760 96 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RNU6-309P-201ENST00000364573 106 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SNORD61-201ENST00000384252 73 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SNORA8-201ENST00000384574 139 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SNORA67.4-201ENST00000384688 142 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.563-201ENST00000384707 108 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SNORA40.5-201ENST00000391061 128 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.630-201ENST00000411370 108 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SUMO1P4-201ENST00000429430 302 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 HMGN2P3-201ENST00000433603 273 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RPS15AP28-201ENST00000435088 386 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 HMGN2P5-201ENST00000436882 273 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RPS12P2-201ENST00000439728 269 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RNU1-41P-201ENST00000516161 162 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.666-201ENST00000516187 112 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RNA5SP282-201ENST00000516355 108 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RNU1-48P-201ENST00000516400 162 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SNORA31.15-201ENST00000516771 132 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 MIR3121-201ENST00000579680 77 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 AC131055.1-201ENST00000584626 316 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 AC005786.1-201ENST00000588553 154 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 AL137847.3-201ENST00000611521 109 ntBASIC2.81□□□□□ -1.96
CHMP4BP1P59074 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CHMP4BP1P59074 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.8□□□□□ -1.96
CHMP4BP1P59074 MIR597-201ENST00000384968 97 ntBASIC2.8□□□□□ -1.96
CHMP4BP1P59074 RNA5SP465-201ENST00000391195 109 ntBASIC2.8□□□□□ -1.96
CHMP4BP1P59074 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP4BP1P59074 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.8□□□□□ -1.96
CHMP4BP1P59074 RNU1-142P-201ENST00000516682 145 ntBASIC2.8□□□□□ -1.96
CHMP4BP1P59074 RNA5SP402-201ENST00000517148 110 ntBASIC2.8□□□□□ -1.96
CHMP4BP1P59074 ZNF658B-202ENST00000615961 3375 ntBASIC2.8□□□□□ -1.96
CHMP4BP1P59074 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
CHMP4BP1P59074 MIR126-201ENST00000362291 85 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.120-201ENST00000363304 110 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 RNU6-1325P-201ENST00000364905 105 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 MIR522-201ENST00000385071 87 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.651-201ENST00000459380 103 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 RNU6-772P-201ENST00000516042 105 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.712-201ENST00000517011 92 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 RNU6-1270P-201ENST00000517128 108 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 MIR3129-201ENST00000581095 76 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 AL365205.2-201ENST00000594586 68 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 MIR7843-201ENST00000622274 79 ntBASIC2.79□□□□□ -1.96
CHMP4BP1P59074 Y_RNA.114-201ENST00000363265 113 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AL035461.1-201ENST00000421490 332 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AC018634.1-201ENST00000437554 401 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AC023449.1-201ENST00000454464 154 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 snoU13.26-201ENST00000459452 105 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.78□□□□□ -1.96
CHMP4BP1P59074 RNU6-365P-201ENST00000517113 106 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 MIR5092-201ENST00000583139 88 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 AC245060.5-201ENST00000610778 3293 ntBASIC2.78□□□□□ -1.96
CHMP4BP1P59074 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
CHMP4BP1P59074 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHMP4BP1P59074 RNA5SP393-201ENST00000363423 117 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 SNORA67.1-201ENST00000364749 141 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 MIR524-201ENST00000385242 87 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
CHMP4BP1P59074 RNA5SP109-201ENST00000391010 116 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 RNA5SP323-201ENST00000391094 133 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 MIR891A-201ENST00000401237 79 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 HMGN2P35-201ENST00000412164 270 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 CST2P1-201ENST00000425770 87 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 AL158147.1-201ENST00000443970 75 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 MIR4662B-201ENST00000579498 81 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.77□□□□□ -1.97
CHMP4BP1P59074 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHMP4BP1P59074 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
CHMP4BP1P59074 AC007336.1-201ENST00000576365 3828 ntBASIC2.77□□□□□ -1.97
CHMP4BP1P59074 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CHMP4BP1P59074 MIR518F-201ENST00000384973 87 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 MIR624-201ENST00000385217 97 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 AC234781.5-201ENST00000508429 271 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 RNA5SP236-201ENST00000516169 116 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 Y_RNA.690-201ENST00000516603 95 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 IGKV1-22-201ENST00000524313 326 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 MIR4529-201ENST00000578110 78 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 AC046143.2-201ENST00000609789 160 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.76□□□□□ -1.97
CHMP4BP1P59074 MIR3914-2-201ENST00000637339 95 ntBASIC2.76□□□□□ -1.97
CHMP4BP1P59074 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CHMP4BP1P59074 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CHMP4BP1P59074 RNU6-888P-201ENST00000363010 101 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 AL049830.1-201ENST00000468034 425 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 RNU6-781P-201ENST00000516377 101 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 RNA5SP281-201ENST00000516504 135 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 AL358944.1-201ENST00000528537 144 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 AC090049.2-201ENST00000550377 109 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 MIR4446-201ENST00000578505 67 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 AC108081.1-201ENST00000604358 221 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 MIR6129-201ENST00000616087 109 ntBASIC2.75□□□□□ -1.97
CHMP4BP1P59074 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms