Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 SNORD45.4-201ENST00000516629 73 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 AC090142.3-201ENST00000519012 385 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.12□□□□□ -2.07
CLRN1P58418 MIR1291-201ENST00000627649 87 ntBASIC2.12□□□□□ -2.07
CLRN1P58418 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
CLRN1P58418 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.12□□□□□ -2.07
CLRN1P58418 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CLRN1P58418 AL136360.1-201ENST00000503377 1900 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CLRN1P58418 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CLRN1P58418 RNU6-112P-201ENST00000363599 104 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 SNORD14E-201ENST00000364009 85 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 Y_RNA.242-201ENST00000364473 110 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 snoU2-30.1-201ENST00000365012 70 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 SNORD61-201ENST00000384252 73 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 Y_RNA.542-201ENST00000384641 111 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 MIR520A-201ENST00000384862 85 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 MIR144-201ENST00000384886 86 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 RN7SKP200-201ENST00000410564 320 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 RNU2-7P-201ENST00000410794 178 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 RNA5SP450-201ENST00000411206 102 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 RNU6-1270P-201ENST00000517128 108 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 RNU6-1116P-201ENST00000517269 99 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 AC007751.1-201ENST00000529260 376 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 SNORA28-201ENST00000606769 126 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 AC067747.1-201ENST00000608026 250 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.11□□□□□ -2.07
CLRN1P58418 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLRN1P58418 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 SNORA1-201ENST00000384107 130 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 RNU6-296P-201ENST00000384608 107 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 RNU6-959P-201ENST00000384671 107 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 RPL23AP63-201ENST00000498752 471 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 RNA5SP437-201ENST00000517249 129 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 MIR4529-201ENST00000578110 78 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 AC007336.1-201ENST00000576365 3828 ntBASIC2.1□□□□□ -2.07
CLRN1P58418 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.1□□□□□ -2.07
CLRN1P58418 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLRN1P58418 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
CLRN1P58418 ICE2P2-201ENST00000483823 2787 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 SNORD24-201ENST00000383884 75 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 RNU6-442P-201ENST00000383968 104 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 RNU6-950P-201ENST00000384651 107 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 SNORA80E-201ENST00000384744 137 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 Y_RNA.584-201ENST00000391090 114 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 MIR548I2-201ENST00000408348 149 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.09□□□□□ -2.07
CLRN1P58418 SNRPGP13-201ENST00000442212 177 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 RNU6-693P-201ENST00000516134 107 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.09□□□□□ -2.07
CLRN1P58418 MIR3129-201ENST00000581095 76 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 AL365205.2-201ENST00000594586 68 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 MIR6895-201ENST00000613497 78 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 AC245884.12-201ENST00000615364 59 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 U1.36-201ENST00000620684 176 ntBASIC2.09□□□□□ -2.07
CLRN1P58418 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
CLRN1P58418 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN1P58418 AC016717.2-201ENST00000609089 5141 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN1P58418 MIRLET7C-201ENST00000362160 84 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 RNU6-888P-201ENST00000363010 101 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 RNU6-1117P-201ENST00000384525 104 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 MIR548A2-201ENST00000384956 97 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AL034345.1-201ENST00000407768 123 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AC011753.1-201ENST00000451001 220 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AC114811.1-201ENST00000507207 168 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 SNORA18.4-201ENST00000516440 124 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 RNA5SP82-201ENST00000516707 92 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 RNU6-971P-201ENST00000516920 106 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AP001328.1-201ENST00000528550 176 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AC103810.6-201ENST00000606708 136 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AP001340.1-201ENST00000624405 217 ntBASIC2.08□□□□□ -2.08
CLRN1P58418 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN1P58418 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLRN1P58418 RNU6-268P-201ENST00000364174 107 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 RNU6-915P-201ENST00000364943 103 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 RNU6-163P-201ENST00000384396 106 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 RNU6-1031P-201ENST00000384773 107 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 CALM2P4-201ENST00000430810 426 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 SNRPGP14-201ENST00000435400 219 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 RNU6-1211P-201ENST00000459179 105 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 SCARNA16.3-201ENST00000516595 184 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 MIR3162-201ENST00000581818 82 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 MIR4435-1-201ENST00000582552 80 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 AC131055.1-201ENST00000584626 316 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 AC006441.5-201ENST00000612680 209 ntBASIC2.07□□□□□ -2.08
CLRN1P58418 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.07□□□□□ -2.08
CLRN1P58418 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CLRN1P58418 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
CLRN1P58418 MIRLET7G-201ENST00000362280 84 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 Y_RNA.336-201ENST00000365307 109 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 MIR518F-201ENST00000384973 87 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 MIR624-201ENST00000385217 97 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 U8.16-201ENST00000391279 133 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 RNA5SP100-201ENST00000410903 110 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 RNA5SP59-201ENST00000410922 110 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 RNA5SP127-201ENST00000411051 133 ntBASIC2.06□□□□□ -2.08
CLRN1P58418 CYCTP-201ENST00000504253 315 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms