Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 RNU6-268P-201ENST00000364174 107 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 RNU6-1031P-201ENST00000384773 107 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 MIR196B-201ENST00000384852 84 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 MIR548A2-201ENST00000384956 97 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 MIR518F-201ENST00000384973 87 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 RNU6-1154P-201ENST00000391001 104 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 RNA5SP282-201ENST00000516355 108 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 Y_RNA.692-201ENST00000516627 105 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 MIR4709-201ENST00000577272 72 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 AC245884.12-201ENST00000615364 59 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.39□□□□□ -2.03
GFRA1P56159 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.39□□□□□ -2.03
GFRA1P56159 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
GFRA1P56159 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
GFRA1P56159 MIRLET7C-201ENST00000362160 84 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 Y_RNA.52-201ENST00000362760 96 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
GFRA1P56159 SNORD38C-201ENST00000384381 69 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 RNU6-296P-201ENST00000384608 107 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 SUMO1P4-201ENST00000429430 302 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 CALM2P4-201ENST00000430810 426 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 snoU13.27-201ENST00000459278 104 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 ICE2P2-201ENST00000483823 2787 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
GFRA1P56159 MIR4635-201ENST00000583759 79 ntBASIC2.38□□□□□ -2.03
GFRA1P56159 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.38□□□□□ -2.03
GFRA1P56159 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
GFRA1P56159 AL136360.1-201ENST00000503377 1900 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 Y_RNA.218-201ENST00000364218 104 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 RNU6-80P-201ENST00000384195 107 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 RNU6-424P-201ENST00000384367 105 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 AL590004.2-201ENST00000404787 371 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 SNORD88.1-201ENST00000408684 91 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.37□□□□□ -2.03
GFRA1P56159 SNRPGP14-201ENST00000435400 219 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 MTATP6P21-201ENST00000440681 189 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 RNU6-1116P-201ENST00000517269 99 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.37□□□□□ -2.03
GFRA1P56159 MIR5194-201ENST00000582634 120 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 AL365222.1-201ENST00000614661 98 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 AC134878.1-201ENST00000619901 243 ntBASIC2.37□□□□□ -2.03
GFRA1P56159 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
GFRA1P56159 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
GFRA1P56159 Y_RNA.71-201ENST00000362892 104 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 SNORD116-14-201ENST00000383894 92 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 SNORD116-17-201ENST00000383929 92 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 SNORD116-15-201ENST00000384445 92 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 SNORD116-19-201ENST00000384729 92 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 RNU6-1168P-201ENST00000390831 104 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 U8.16-201ENST00000391279 133 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 MIR891A-201ENST00000401237 79 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.36□□□□□ -2.03
GFRA1P56159 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.36□□□□□ -2.03
GFRA1P56159 Y_RNA.686-201ENST00000516548 134 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 RNA5SP168-201ENST00000516642 112 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 RNU2-19P-201ENST00000517288 84 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 AC015726.2-201ENST00000620112 122 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 AC131280.1-202ENST00000624067 4211 ntBASIC2.36□□□□□ -2.03
GFRA1P56159 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
GFRA1P56159 Y_RNA.127-201ENST00000363386 109 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 RNU6-833P-201ENST00000363486 107 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 SNORD115-28-201ENST00000363931 81 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 Y_RNA.410-201ENST00000383992 113 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 SNORD77.3-201ENST00000391113 65 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 AL603914.1-201ENST00000401964 204 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 AF228730.3-201ENST00000436691 102 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 RNU7-12P-201ENST00000516030 62 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 SCARNA16.3-201ENST00000516595 184 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 Y_RNA.690-201ENST00000516603 95 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 RNU6-1234P-201ENST00000516877 103 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 MIR4513-201ENST00000581077 86 ntBASIC2.35□□□□□ -2.03
GFRA1P56159 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
GFRA1P56159 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
GFRA1P56159 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
GFRA1P56159 RNA5SP68-201ENST00000363885 119 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 Y_RNA.547-201ENST00000384654 119 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 SNORD23.1-201ENST00000408212 104 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 RNA5SP100-201ENST00000410903 110 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 RNA5SP59-201ENST00000410922 110 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.34□□□□□ -2.03
GFRA1P56159 RNU4-57P-201ENST00000515980 135 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 RNU6-1333P-201ENST00000516162 93 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 MIR6817-201ENST00000615588 66 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.34□□□□□ -2.03
GFRA1P56159 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.04
GFRA1P56159 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
GFRA1P56159 SNORA67.1-201ENST00000364749 141 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 SNORA22C-201ENST00000384614 134 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 RNA5SP57-201ENST00000459463 123 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 AC055731.1-201ENST00000474387 401 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 RPL23AP94-201ENST00000512518 302 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 MIR5197-201ENST00000583721 112 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 AC021506.2-201ENST00000612354 169 ntBASIC2.33□□□□□ -2.04
GFRA1P56159 AL513423.1-201ENST00000621695 132 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms