Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 AL021707.8-201ENST00000609428 183 ntBASIC1.32□□□□□ -2.2
PAX9P55771 RN7SL853P-201ENST00000617250 223 ntBASIC1.32□□□□□ -2.2
PAX9P55771 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
PAX9P55771 ICE2P2-201ENST00000483823 2787 ntBASIC1.32□□□□□ -2.2
PAX9P55771 Y_RNA.304-201ENST00000365011 112 ntBASIC1.31□□□□□ -2.2
PAX9P55771 MIR513A1-201ENST00000385138 129 ntBASIC1.31□□□□□ -2.2
PAX9P55771 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.31□□□□□ -2.2
PAX9P55771 HSPE1P24-201ENST00000450782 238 ntBASIC1.31□□□□□ -2.2
PAX9P55771 Y_RNA.638-201ENST00000459374 113 ntBASIC1.31□□□□□ -2.2
PAX9P55771 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.31□□□□□ -2.2
PAX9P55771 RNU6-1023P-201ENST00000516137 106 ntBASIC1.31□□□□□ -2.2
PAX9P55771 Y_RNA.679-201ENST00000516416 91 ntBASIC1.31□□□□□ -2.2
PAX9P55771 RNU6-111P-201ENST00000517179 105 ntBASIC1.31□□□□□ -2.2
PAX9P55771 AC100767.1-201ENST00000528178 123 ntBASIC1.31□□□□□ -2.2
PAX9P55771 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.31□□□□□ -2.2
PAX9P55771 MIR8063-201ENST00000621930 81 ntBASIC1.31□□□□□ -2.2
PAX9P55771 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.31□□□□□ -2.2
PAX9P55771 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PAX9P55771 RNU6-457P-201ENST00000363999 107 ntBASIC1.3□□□□□ -2.2
PAX9P55771 SNORD1A-201ENST00000364968 72 ntBASIC1.3□□□□□ -2.2
PAX9P55771 SNORD50B-201ENST00000364995 70 ntBASIC1.3□□□□□ -2.2
PAX9P55771 Y_RNA.478-201ENST00000384358 107 ntBASIC1.3□□□□□ -2.2
PAX9P55771 MIR526A2-201ENST00000390198 65 ntBASIC1.3□□□□□ -2.2
PAX9P55771 MIR1261-201ENST00000408659 82 ntBASIC1.3□□□□□ -2.2
PAX9P55771 RPL30P13-201ENST00000418873 348 ntBASIC1.3□□□□□ -2.2
PAX9P55771 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.3□□□□□ -2.2
PAX9P55771 CYCTP-201ENST00000504253 315 ntBASIC1.3□□□□□ -2.2
PAX9P55771 RNU7-12P-201ENST00000516030 62 ntBASIC1.3□□□□□ -2.2
PAX9P55771 MIR4255-201ENST00000579351 72 ntBASIC1.3□□□□□ -2.2
PAX9P55771 MIR3945-201ENST00000581853 98 ntBASIC1.3□□□□□ -2.2
PAX9P55771 AL442067.1-201ENST00000613261 223 ntBASIC1.3□□□□□ -2.2
PAX9P55771 JPX_2.1-201ENST00000614161 69 ntBASIC1.3□□□□□ -2.2
PAX9P55771 AL365265.1-201ENST00000621045 234 ntBASIC1.3□□□□□ -2.2
PAX9P55771 AC106754.2-201ENST00000623006 233 ntBASIC1.3□□□□□ -2.2
PAX9P55771 AC027279.3-201ENST00000625055 122 ntBASIC1.3□□□□□ -2.2
PAX9P55771 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
PAX9P55771 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.29□□□□□ -2.2
PAX9P55771 MIR367-201ENST00000362299 68 ntBASIC1.29□□□□□ -2.2
PAX9P55771 Y_RNA.24-201ENST00000362508 103 ntBASIC1.29□□□□□ -2.2
PAX9P55771 Y_RNA.65-201ENST00000362846 100 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RNU6-653P-201ENST00000363074 106 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RNU6-833P-201ENST00000363486 107 ntBASIC1.29□□□□□ -2.2
PAX9P55771 Y_RNA.292-201ENST00000364904 97 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RNA5SP259-201ENST00000365541 109 ntBASIC1.29□□□□□ -2.2
PAX9P55771 MIR626-201ENST00000385032 94 ntBASIC1.29□□□□□ -2.2
PAX9P55771 MIR320A-201ENST00000385302 82 ntBASIC1.29□□□□□ -2.2
PAX9P55771 U8.13-201ENST00000390842 128 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RNU6-131P-201ENST00000391144 107 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RN7SKP101-201ENST00000411376 320 ntBASIC1.29□□□□□ -2.2
PAX9P55771 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
PAX9P55771 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
PAX9P55771 AC092991.1-201ENST00000477176 376 ntBASIC1.29□□□□□ -2.2
PAX9P55771 SNORD45.4-201ENST00000516629 73 ntBASIC1.29□□□□□ -2.2
PAX9P55771 MIR4724-201ENST00000579485 89 ntBASIC1.29□□□□□ -2.2
PAX9P55771 MIR2681-201ENST00000581814 105 ntBASIC1.29□□□□□ -2.2
PAX9P55771 AL365434.2-201ENST00000607979 234 ntBASIC1.29□□□□□ -2.2
PAX9P55771 Y_RNA.802-201ENST00000614892 130 ntBASIC1.29□□□□□ -2.2
PAX9P55771 RNY4P28-201ENST00000365281 93 ntBASIC1.28□□□□□ -2.2
PAX9P55771 RNU6-163P-201ENST00000384396 106 ntBASIC1.28□□□□□ -2.2
PAX9P55771 SNORA8.3-201ENST00000384679 139 ntBASIC1.28□□□□□ -2.2
PAX9P55771 MIR526A1-201ENST00000384897 85 ntBASIC1.28□□□□□ -2.2
PAX9P55771 MIR891A-201ENST00000401237 79 ntBASIC1.28□□□□□ -2.2
PAX9P55771 SNORA11.2-201ENST00000408318 127 ntBASIC1.28□□□□□ -2.2
PAX9P55771 RNU6-917P-201ENST00000516294 104 ntBASIC1.28□□□□□ -2.2
PAX9P55771 AC019176.1-201ENST00000518519 225 ntBASIC1.28□□□□□ -2.2
PAX9P55771 AC008507.4-201ENST00000585464 127 ntBASIC1.28□□□□□ -2.2
PAX9P55771 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.28□□□□□ -2.2
PAX9P55771 AC006006.1-201ENST00000603082 144 ntBASIC1.28□□□□□ -2.2
PAX9P55771 AC084768.2-201ENST00000622736 221 ntBASIC1.28□□□□□ -2.2
PAX9P55771 RNU6-199P-201ENST00000362954 107 ntBASIC1.27□□□□□ -2.21
PAX9P55771 snoU2_19.4-201ENST00000364329 80 ntBASIC1.27□□□□□ -2.21
PAX9P55771 Y_RNA.229-201ENST00000364347 113 ntBASIC1.27□□□□□ -2.21
PAX9P55771 SNORA20.1-201ENST00000364790 130 ntBASIC1.27□□□□□ -2.21
PAX9P55771 Y_RNA.401-201ENST00000383965 117 ntBASIC1.27□□□□□ -2.21
PAX9P55771 SNORD72-201ENST00000390994 80 ntBASIC1.27□□□□□ -2.21
PAX9P55771 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
PAX9P55771 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.27□□□□□ -2.21
PAX9P55771 snoU13.26-201ENST00000459452 105 ntBASIC1.27□□□□□ -2.21
PAX9P55771 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.27□□□□□ -2.21
PAX9P55771 RNY3P16-201ENST00000516338 101 ntBASIC1.27□□□□□ -2.21
PAX9P55771 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.27□□□□□ -2.21
PAX9P55771 AL049861.1-201ENST00000603130 150 ntBASIC1.27□□□□□ -2.21
PAX9P55771 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
PAX9P55771 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
PAX9P55771 RNU6-1084P-201ENST00000362498 107 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNU6-379P-201ENST00000363813 104 ntBASIC1.26□□□□□ -2.21
PAX9P55771 Y_RNA.188-201ENST00000363952 111 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNY1-201ENST00000364228 113 ntBASIC1.26□□□□□ -2.21
PAX9P55771 snoU2-30.1-201ENST00000365012 70 ntBASIC1.26□□□□□ -2.21
PAX9P55771 MT-TG-201ENST00000387429 68 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNA5SP496-201ENST00000391240 109 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
PAX9P55771 MIR1298-201ENST00000408783 112 ntBASIC1.26□□□□□ -2.21
PAX9P55771 SNRPGP14-201ENST00000435400 219 ntBASIC1.26□□□□□ -2.21
PAX9P55771 AC245047.8-201ENST00000456455 284 ntBASIC1.26□□□□□ -2.21
PAX9P55771 SCARNA8-201ENST00000515924 131 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNU6-295P-201ENST00000516901 104 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNU6-250P-201ENST00000516958 103 ntBASIC1.26□□□□□ -2.21
PAX9P55771 RNU6-1271P-201ENST00000517049 105 ntBASIC1.26□□□□□ -2.21
PAX9P55771 MIR5688-201ENST00000580619 83 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms