Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MIR1302-1-201ENST00000637932 143 ntBASIC0.59□□□□□ -2.31
CDH4P55283 RNU6-1115P-201ENST00000362490 106 ntBASIC0.58□□□□□ -2.32
CDH4P55283 Y_RNA.368-201ENST00000365547 113 ntBASIC0.58□□□□□ -2.32
CDH4P55283 SNORD14.1-201ENST00000365609 90 ntBASIC0.58□□□□□ -2.32
CDH4P55283 SNORD99-201ENST00000408612 74 ntBASIC0.58□□□□□ -2.32
CDH4P55283 MIR1302-7-201ENST00000408841 72 ntBASIC0.58□□□□□ -2.32
CDH4P55283 RNU6-710P-201ENST00000410424 105 ntBASIC0.58□□□□□ -2.32
CDH4P55283 MTCO2P27-201ENST00000420740 428 ntBASIC0.58□□□□□ -2.32
CDH4P55283 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.58□□□□□ -2.32
CDH4P55283 RNU7-43P-201ENST00000516554 64 ntBASIC0.58□□□□□ -2.32
CDH4P55283 DEFB117-201ENST00000602356 141 ntBASIC0.58□□□□□ -2.32
CDH4P55283 AC104985.2-201ENST00000620598 500 ntBASIC0.58□□□□□ -2.32
CDH4P55283 Y_RNA.187-201ENST00000363918 113 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.341-201ENST00000365341 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.384-201ENST00000383909 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.428-201ENST00000384078 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.456-201ENST00000384232 111 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.458-201ENST00000384240 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.462-201ENST00000384268 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 MIR15B-201ENST00000385045 98 ntBASIC0.57□□□□□ -2.32
CDH4P55283 MIR92A1-201ENST00000385233 78 ntBASIC0.57□□□□□ -2.32
CDH4P55283 HMGN2P32-201ENST00000444648 269 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AL392103.1-201ENST00000447000 198 ntBASIC0.57□□□□□ -2.32
CDH4P55283 Y_RNA.632-201ENST00000459189 102 ntBASIC0.57□□□□□ -2.32
CDH4P55283 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
CDH4P55283 U7.7-201ENST00000459276 60 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AC010655.3-201ENST00000478818 450 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.57□□□□□ -2.32
CDH4P55283 FGF7P4-201ENST00000509595 295 ntBASIC0.57□□□□□ -2.32
CDH4P55283 RNU4-77P-201ENST00000516692 156 ntBASIC0.57□□□□□ -2.32
CDH4P55283 SNORD116.3-201ENST00000517176 78 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.57□□□□□ -2.32
CDH4P55283 AL355375.2-201ENST00000574825 175 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AC025627.3-201ENST00000582078 182 ntBASIC0.57□□□□□ -2.32
CDH4P55283 MIR5188-201ENST00000583467 113 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AL512605.2-201ENST00000592972 256 ntBASIC0.57□□□□□ -2.32
CDH4P55283 POLR3GP1-201ENST00000594073 261 ntBASIC0.57□□□□□ -2.32
CDH4P55283 AP003357.1-201ENST00000604497 148 ntBASIC0.57□□□□□ -2.32
CDH4P55283 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CDH4P55283 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
CDH4P55283 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDH4P55283 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CDH4P55283 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
CDH4P55283 Y_RNA.203-201ENST00000364106 102 ntBASIC0.56□□□□□ -2.32
CDH4P55283 Y_RNA.331-201ENST00000365267 102 ntBASIC0.56□□□□□ -2.32
CDH4P55283 SNRPGP14-201ENST00000435400 219 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
CDH4P55283 RNU7-116P-201ENST00000516940 62 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC024405.2-202ENST00000532731 184 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC005730.3-201ENST00000583067 366 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC122108.2-201ENST00000611946 526 ntBASIC0.56□□□□□ -2.32
CDH4P55283 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC068700.1-201ENST00000565862 3754 ntBASIC0.56□□□□□ -2.32
CDH4P55283 AC134026.1-201ENST00000623249 2239 ntBASIC0.56□□□□□ -2.32
CDH4P55283 Y_RNA.5-201ENST00000362334 102 ntBASIC0.55□□□□□ -2.32
CDH4P55283 SNORA72.1-201ENST00000363485 129 ntBASIC0.55□□□□□ -2.32
CDH4P55283 RNA5SP48-201ENST00000363969 126 ntBASIC0.55□□□□□ -2.32
CDH4P55283 U8.7-201ENST00000364940 136 ntBASIC0.55□□□□□ -2.32
CDH4P55283 Y_RNA.303-201ENST00000364998 94 ntBASIC0.55□□□□□ -2.32
CDH4P55283 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
CDH4P55283 SNORD28B-201ENST00000390993 75 ntBASIC0.55□□□□□ -2.32
CDH4P55283 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
CDH4P55283 SNORD19B-201ENST00000459623 84 ntBASIC0.55□□□□□ -2.32
CDH4P55283 HMGN1P10-201ENST00000474557 553 ntBASIC0.55□□□□□ -2.32
CDH4P55283 NDUFA4P2-201ENST00000489989 244 ntBASIC0.55□□□□□ -2.32
CDH4P55283 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.55□□□□□ -2.32
CDH4P55283 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
CDH4P55283 RNU7-115P-201ENST00000516433 55 ntBASIC0.55□□□□□ -2.32
CDH4P55283 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
CDH4P55283 AC036111.3-201ENST00000526389 112 ntBASIC0.55□□□□□ -2.32
CDH4P55283 AC127455.1-201ENST00000565496 145 ntBASIC0.55□□□□□ -2.32
CDH4P55283 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
CDH4P55283 AC092447.9-201ENST00000603395 144 ntBASIC0.55□□□□□ -2.32
CDH4P55283 SNORD58B-201ENST00000607313 66 ntBASIC0.55□□□□□ -2.32
CDH4P55283 RNU6-94P-201ENST00000607728 107 ntBASIC0.55□□□□□ -2.32
CDH4P55283 PVT1_3.1-201ENST00000620853 95 ntBASIC0.55□□□□□ -2.32
CDH4P55283 MIR6513-201ENST00000621188 64 ntBASIC0.55□□□□□ -2.32
CDH4P55283 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.55□□□□□ -2.32
CDH4P55283 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.54□□□□□ -2.32
CDH4P55283 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
CDH4P55283 RNU6-1209P-201ENST00000363655 107 ntBASIC0.54□□□□□ -2.32
CDH4P55283 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
CDH4P55283 Y_RNA.252-201ENST00000364556 101 ntBASIC0.54□□□□□ -2.32
CDH4P55283 RNU6-994P-201ENST00000410507 111 ntBASIC0.54□□□□□ -2.32
CDH4P55283 SNORA40.14-201ENST00000516543 86 ntBASIC0.54□□□□□ -2.32
CDH4P55283 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
CDH4P55283 MIR3145-201ENST00000580727 82 ntBASIC0.54□□□□□ -2.32
CDH4P55283 AL121655.1-201ENST00000605811 308 ntBASIC0.54□□□□□ -2.32
CDH4P55283 Y_RNA.772-201ENST00000606692 102 ntBASIC0.54□□□□□ -2.32
CDH4P55283 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.54□□□□□ -2.32
CDH4P55283 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
CDH4P55283 Y_RNA.70-201ENST00000362886 110 ntBASIC0.53□□□□□ -2.32
CDH4P55283 Y_RNA.80-201ENST00000362996 102 ntBASIC0.53□□□□□ -2.32
CDH4P55283 SNORD14E-201ENST00000364009 85 ntBASIC0.53□□□□□ -2.32
CDH4P55283 RNU1-115P-201ENST00000365329 160 ntBASIC0.53□□□□□ -2.32
CDH4P55283 SNORD63-201ENST00000384262 68 ntBASIC0.53□□□□□ -2.32
CDH4P55283 Y_RNA.485-201ENST00000384395 102 ntBASIC0.53□□□□□ -2.32
CDH4P55283 Y_RNA.551-201ENST00000384661 102 ntBASIC0.53□□□□□ -2.32
CDH4P55283 MTND1P14-201ENST00000427400 950 ntBASIC0.53□□□□□ -2.32
CDH4P55283 AC098869.1-201ENST00000481627 292 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms