Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 RNU6-823P-201ENST00000391042 103 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 RNU6-131P-201ENST00000391144 107 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 Y_RNA.645-201ENST00000391229 102 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 SNRPGP10-201ENST00000432323 225 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 AL133373.1-201ENST00000497098 94 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 RNU6-113P-201ENST00000516653 101 ntBASIC1.23□□□□□ -2.21
LIMK1P53667 Y_RNA.183-201ENST00000363882 113 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 MIR452-201ENST00000385020 85 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 AC005534.2-201ENST00000431047 433 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 LINC01399-202ENST00000458450 244 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 HMGN1P10-201ENST00000474557 553 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 SNORD45.4-201ENST00000516629 73 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 RNU6-897P-201ENST00000517135 105 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.22□□□□□ -2.21
LIMK1P53667 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.22□□□□□ -2.21
LIMK1P53667 AC136932.1-201ENST00000574771 208 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 JPX_2.1-201ENST00000614161 69 ntBASIC1.22□□□□□ -2.21
LIMK1P53667 RNU4-80P-201ENST00000363200 141 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 U8.7-201ENST00000364940 136 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 snoU2-30.1-201ENST00000365012 70 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 SNORA22B-201ENST00000383876 138 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 Y_RNA.394-201ENST00000383942 103 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 MIR802-201ENST00000390235 94 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 MIR548P-201ENST00000408336 84 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 MIR1252-201ENST00000408861 65 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.21□□□□□ -2.22
LIMK1P53667 RNA5SP404-201ENST00000517118 132 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 AC024405.2-202ENST00000532731 184 ntBASIC1.21□□□□□ -2.22
LIMK1P53667 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.21□□□□□ -2.22
LIMK1P53667 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.21□□□□□ -2.22
LIMK1P53667 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.21□□□□□ -2.22
LIMK1P53667 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
LIMK1P53667 Y_RNA.138-201ENST00000363462 102 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 U8.5-201ENST00000364528 136 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 SNORD41-201ENST00000386967 70 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 MIR1298-201ENST00000408783 112 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 AC087343.1-201ENST00000477341 475 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 AC010655.3-201ENST00000478818 450 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 RNY3P15-201ENST00000516297 97 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 RNU7-115P-201ENST00000516433 55 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 SNORA70.22-201ENST00000517160 124 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 RNU6-165P-201ENST00000517170 99 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 MIR4300-201ENST00000581016 96 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 HSPE1P19-201ENST00000603327 295 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 MIR548AY-201ENST00000617669 107 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 AC012676.2-201ENST00000619258 186 ntBASIC1.2□□□□□ -2.22
LIMK1P53667 Y_RNA.203-201ENST00000364106 102 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 AC117470.1-201ENST00000381974 330 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 SNORA25-201ENST00000384384 134 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 MIR516B2-201ENST00000385190 85 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
LIMK1P53667 SNORA31.2-201ENST00000516019 134 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 SNORA31.4-201ENST00000516049 129 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 MIR5000-201ENST00000577717 103 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 MIR3171-201ENST00000584270 74 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 MIR4762-201ENST00000585261 75 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 AP003357.1-201ENST00000604497 148 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 RAC1P9-201ENST00000604990 392 ntBASIC1.19□□□□□ -2.22
LIMK1P53667 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.18□□□□□ -2.22
LIMK1P53667 AC134026.1-201ENST00000623249 2239 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 RNU4-90P-201ENST00000362773 141 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 Y_RNA.380-201ENST00000365663 111 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 Y_RNA.569-201ENST00000384749 103 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 MIR526A1-201ENST00000384897 85 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 MIR136-201ENST00000385207 82 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 AC048334.1-201ENST00000477975 159 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 AC136628.3-201ENST00000521868 290 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 BX284668.6-201ENST00000606899 438 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 AC007742.2-201ENST00000618226 398 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 AC008133.2-201ENST00000624540 351 ntBASIC1.18□□□□□ -2.22
LIMK1P53667 Y_RNA.152-201ENST00000363578 100 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 SNORD14E-201ENST00000364009 85 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 RNU6-1048P-201ENST00000364054 107 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 Y_RNA.202-201ENST00000364083 110 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 Y_RNA.527-201ENST00000384573 102 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
LIMK1P53667 RNU6-910P-201ENST00000390844 107 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 SNORA36B-201ENST00000410438 131 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 HMGN2P32-201ENST00000444648 269 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.17□□□□□ -2.22
LIMK1P53667 RNA5SP436-201ENST00000516020 115 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 SNORD116-28-201ENST00000516123 91 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 Y_RNA.711-201ENST00000516993 102 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 AC090821.2-201ENST00000523552 176 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 MIR2681-201ENST00000581814 105 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 AL512605.2-201ENST00000592972 256 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
LIMK1P53667 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.17□□□□□ -2.22
LIMK1P53667 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.17□□□□□ -2.22
LIMK1P53667 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
LIMK1P53667 Y_RNA.158-201ENST00000363651 101 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 RNU1-124P-201ENST00000363861 145 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 Y_RNA.216-201ENST00000364205 93 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 SNORD50B-201ENST00000364995 70 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 Y_RNA.455-201ENST00000384230 98 ntBASIC1.16□□□□□ -2.22
LIMK1P53667 RNY1P4-201ENST00000384595 115 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms