Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.4□□□□□ -2.19
PDX1P52945 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.4□□□□□ -2.19
PDX1P52945 RNU6-1272P-201ENST00000362776 107 ntBASIC1.39□□□□□ -2.19
PDX1P52945 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
PDX1P52945 Y_RNA.237-201ENST00000364439 102 ntBASIC1.39□□□□□ -2.19
PDX1P52945 Y_RNA.396-201ENST00000383949 103 ntBASIC1.39□□□□□ -2.19
PDX1P52945 Y_RNA.461-201ENST00000384263 103 ntBASIC1.39□□□□□ -2.19
PDX1P52945 MIR489-201ENST00000384923 84 ntBASIC1.39□□□□□ -2.19
PDX1P52945 MTCO2P33-201ENST00000402100 465 ntBASIC1.39□□□□□ -2.19
PDX1P52945 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.39□□□□□ -2.19
PDX1P52945 PIGPP3-201ENST00000425307 415 ntBASIC1.39□□□□□ -2.19
PDX1P52945 RNU1-123P-201ENST00000458950 160 ntBASIC1.39□□□□□ -2.19
PDX1P52945 U8.19-201ENST00000459095 133 ntBASIC1.39□□□□□ -2.19
PDX1P52945 RPL23AP54-201ENST00000495129 419 ntBASIC1.39□□□□□ -2.19
PDX1P52945 RNU7-116P-201ENST00000516940 62 ntBASIC1.39□□□□□ -2.19
PDX1P52945 MIR6504-201ENST00000613520 61 ntBASIC1.39□□□□□ -2.19
PDX1P52945 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PDX1P52945 Y_RNA.162-201ENST00000363683 102 ntBASIC1.38□□□□□ -2.19
PDX1P52945 RNU6-514P-201ENST00000384208 107 ntBASIC1.38□□□□□ -2.19
PDX1P52945 MIR518E-201ENST00000385252 88 ntBASIC1.38□□□□□ -2.19
PDX1P52945 BTF3P11-201ENST00000426582 477 ntBASIC1.38□□□□□ -2.19
PDX1P52945 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.38□□□□□ -2.19
PDX1P52945 AC027119.1-201ENST00000440877 241 ntBASIC1.38□□□□□ -2.19
PDX1P52945 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.38□□□□□ -2.19
PDX1P52945 Y_RNA.637-201ENST00000459424 114 ntBASIC1.38□□□□□ -2.19
PDX1P52945 RNA5SP445-201ENST00000515889 115 ntBASIC1.38□□□□□ -2.19
PDX1P52945 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.38□□□□□ -2.19
PDX1P52945 AL512605.2-201ENST00000592972 256 ntBASIC1.38□□□□□ -2.19
PDX1P52945 AC120024.3-201ENST00000603167 156 ntBASIC1.38□□□□□ -2.19
PDX1P52945 AC037487.3-201ENST00000606668 112 ntBASIC1.38□□□□□ -2.19
PDX1P52945 AL353770.2-201ENST00000620024 78 ntBASIC1.38□□□□□ -2.19
PDX1P52945 Y_RNA.47-201ENST00000362697 108 ntBASIC1.37□□□□□ -2.19
PDX1P52945 Y_RNA.217-201ENST00000364214 105 ntBASIC1.37□□□□□ -2.19
PDX1P52945 U8.5-201ENST00000364528 136 ntBASIC1.37□□□□□ -2.19
PDX1P52945 MIR522-201ENST00000385071 87 ntBASIC1.37□□□□□ -2.19
PDX1P52945 RNU6-1248P-201ENST00000391096 64 ntBASIC1.37□□□□□ -2.19
PDX1P52945 MIR1278-201ENST00000408753 81 ntBASIC1.37□□□□□ -2.19
PDX1P52945 SNORA36B-201ENST00000410438 131 ntBASIC1.37□□□□□ -2.19
PDX1P52945 RN7SKP51-201ENST00000410781 304 ntBASIC1.37□□□□□ -2.19
PDX1P52945 AL118496.2-201ENST00000448300 230 ntBASIC1.37□□□□□ -2.19
PDX1P52945 Y_RNA.641-201ENST00000459414 105 ntBASIC1.37□□□□□ -2.19
PDX1P52945 HMGN1P7-201ENST00000491722 313 ntBASIC1.37□□□□□ -2.19
PDX1P52945 AC079140.2-201ENST00000506193 142 ntBASIC1.37□□□□□ -2.19
PDX1P52945 RNA5SP102-201ENST00000516865 106 ntBASIC1.37□□□□□ -2.19
PDX1P52945 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.37□□□□□ -2.19
PDX1P52945 MIR4762-201ENST00000585261 75 ntBASIC1.37□□□□□ -2.19
PDX1P52945 AL008718.3-201ENST00000610217 321 ntBASIC1.37□□□□□ -2.19
PDX1P52945 AL078604.3-201ENST00000615580 211 ntBASIC1.37□□□□□ -2.19
PDX1P52945 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
PDX1P52945 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
PDX1P52945 Y_RNA.133-201ENST00000363428 110 ntBASIC1.36□□□□□ -2.19
PDX1P52945 Y_RNA.203-201ENST00000364106 102 ntBASIC1.36□□□□□ -2.19
PDX1P52945 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.36□□□□□ -2.19
PDX1P52945 RNU1-98P-201ENST00000458992 160 ntBASIC1.36□□□□□ -2.19
PDX1P52945 AC114811.1-201ENST00000507207 168 ntBASIC1.36□□□□□ -2.19
PDX1P52945 RNU7-12P-201ENST00000516030 62 ntBASIC1.36□□□□□ -2.19
PDX1P52945 MIR3937-201ENST00000580135 106 ntBASIC1.36□□□□□ -2.19
PDX1P52945 MIR4422-201ENST00000581938 83 ntBASIC1.36□□□□□ -2.19
PDX1P52945 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.36□□□□□ -2.19
PDX1P52945 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
PDX1P52945 Y_RNA.176-201ENST00000363815 109 ntBASIC1.35□□□□□ -2.19
PDX1P52945 MIR568-201ENST00000385036 95 ntBASIC1.35□□□□□ -2.19
PDX1P52945 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.35□□□□□ -2.19
PDX1P52945 MLLT10P1-201ENST00000418346 262 ntBASIC1.35□□□□□ -2.19
PDX1P52945 SNRPGP10-201ENST00000432323 225 ntBASIC1.35□□□□□ -2.19
PDX1P52945 MTND4LP30-201ENST00000454092 297 ntBASIC1.35□□□□□ -2.19
PDX1P52945 RNU6-437P-201ENST00000459408 95 ntBASIC1.35□□□□□ -2.19
PDX1P52945 CYCTP-201ENST00000504253 315 ntBASIC1.35□□□□□ -2.19
PDX1P52945 RNU6-917P-201ENST00000516294 104 ntBASIC1.35□□□□□ -2.19
PDX1P52945 RNU6-1045P-201ENST00000516321 107 ntBASIC1.35□□□□□ -2.19
PDX1P52945 SNORA27.4-201ENST00000516650 95 ntBASIC1.35□□□□□ -2.19
PDX1P52945 U2.14-201ENST00000615943 113 ntBASIC1.35□□□□□ -2.19
PDX1P52945 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
PDX1P52945 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.34□□□□□ -2.19
PDX1P52945 UBE2WP1-201ENST00000362030 340 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-199P-201ENST00000362954 107 ntBASIC1.34□□□□□ -2.19
PDX1P52945 Y_RNA.117-201ENST00000363294 101 ntBASIC1.34□□□□□ -2.19
PDX1P52945 Y_RNA.149-201ENST00000363558 117 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-899P-201ENST00000363947 107 ntBASIC1.34□□□□□ -2.19
PDX1P52945 Y_RNA.275-201ENST00000364726 110 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-969P-201ENST00000383900 105 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-163P-201ENST00000384396 106 ntBASIC1.34□□□□□ -2.19
PDX1P52945 Y_RNA.518-201ENST00000384552 113 ntBASIC1.34□□□□□ -2.19
PDX1P52945 MIR526A1-201ENST00000384897 85 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU1-78P-201ENST00000391248 165 ntBASIC1.34□□□□□ -2.19
PDX1P52945 MTCYBP9-201ENST00000431021 303 ntBASIC1.34□□□□□ -2.19
PDX1P52945 AC245517.4-201ENST00000448601 281 ntBASIC1.34□□□□□ -2.19
PDX1P52945 MTCO2P24-201ENST00000515611 426 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-970P-201ENST00000516312 107 ntBASIC1.34□□□□□ -2.19
PDX1P52945 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
PDX1P52945 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.34□□□□□ -2.19
PDX1P52945 AC013791.1-201ENST00000616619 62 ntBASIC1.34□□□□□ -2.19
PDX1P52945 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.34□□□□□ -2.2
PDX1P52945 Y_RNA.122-201ENST00000363331 96 ntBASIC1.33□□□□□ -2.2
PDX1P52945 RNU6-1209P-201ENST00000363655 107 ntBASIC1.33□□□□□ -2.2
PDX1P52945 SNORD41-201ENST00000386967 70 ntBASIC1.33□□□□□ -2.2
PDX1P52945 MIR1302-6-201ENST00000408466 90 ntBASIC1.33□□□□□ -2.2
PDX1P52945 RNU6-651P-201ENST00000411040 105 ntBASIC1.33□□□□□ -2.2
PDX1P52945 RPL30P13-201ENST00000418873 348 ntBASIC1.33□□□□□ -2.2
PDX1P52945 AC004223.1-201ENST00000479840 271 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 150 ms