Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 HMGN1P10-201ENST00000474557 553 ntBASIC0.93□□□□□ -2.26
GPC3P51654 MIR2681-201ENST00000581814 105 ntBASIC0.93□□□□□ -2.26
GPC3P51654 AL020996.3-201ENST00000606617 222 ntBASIC0.93□□□□□ -2.26
GPC3P51654 Y_RNA.310-201ENST00000365063 113 ntBASIC0.92□□□□□ -2.26
GPC3P51654 Y_RNA.336-201ENST00000365307 109 ntBASIC0.92□□□□□ -2.26
GPC3P51654 SNORD42.2-201ENST00000365570 69 ntBASIC0.92□□□□□ -2.26
GPC3P51654 AC117470.1-201ENST00000381974 330 ntBASIC0.92□□□□□ -2.26
GPC3P51654 Y_RNA.445-201ENST00000384168 102 ntBASIC0.92□□□□□ -2.26
GPC3P51654 MIR522-201ENST00000385071 87 ntBASIC0.92□□□□□ -2.26
GPC3P51654 MIR136-201ENST00000385207 82 ntBASIC0.92□□□□□ -2.26
GPC3P51654 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.92□□□□□ -2.26
GPC3P51654 POLR2KP2-201ENST00000438155 177 ntBASIC0.92□□□□□ -2.26
GPC3P51654 SNORD124-201ENST00000459577 104 ntBASIC0.92□□□□□ -2.26
GPC3P51654 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.92□□□□□ -2.26
GPC3P51654 AC114811.1-201ENST00000507207 168 ntBASIC0.92□□□□□ -2.26
GPC3P51654 POLR3GP1-201ENST00000594073 261 ntBASIC0.92□□□□□ -2.26
GPC3P51654 AP003357.1-201ENST00000604497 148 ntBASIC0.92□□□□□ -2.26
GPC3P51654 AC090574.1-201ENST00000623186 233 ntBASIC0.92□□□□□ -2.26
GPC3P51654 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
GPC3P51654 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.91□□□□□ -2.26
GPC3P51654 Y_RNA.143-201ENST00000363520 106 ntBASIC0.91□□□□□ -2.26
GPC3P51654 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.91□□□□□ -2.26
GPC3P51654 MIR942-201ENST00000401111 86 ntBASIC0.91□□□□□ -2.26
GPC3P51654 PIGPP3-201ENST00000425307 415 ntBASIC0.91□□□□□ -2.26
GPC3P51654 MTND1P14-201ENST00000427400 950 ntBASIC0.91□□□□□ -2.26
GPC3P51654 SNRPGP10-201ENST00000432323 225 ntBASIC0.91□□□□□ -2.26
GPC3P51654 MTND4P19-201ENST00000446659 478 ntBASIC0.91□□□□□ -2.26
GPC3P51654 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.91□□□□□ -2.26
GPC3P51654 MTND4LP30-201ENST00000454092 297 ntBASIC0.91□□□□□ -2.26
GPC3P51654 ACA64.5-201ENST00000516207 127 ntBASIC0.91□□□□□ -2.26
GPC3P51654 AC090142.3-201ENST00000519012 385 ntBASIC0.91□□□□□ -2.26
GPC3P51654 RNU6-988P-201ENST00000519081 107 ntBASIC0.91□□□□□ -2.26
GPC3P51654 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.91□□□□□ -2.26
GPC3P51654 JPX_2.1-201ENST00000614161 69 ntBASIC0.91□□□□□ -2.26
GPC3P51654 AL160413.1-201ENST00000622780 310 ntBASIC0.91□□□□□ -2.26
GPC3P51654 RNU6-937P-201ENST00000384325 106 ntBASIC0.9□□□□□ -2.27
GPC3P51654 MIR1298-201ENST00000408783 112 ntBASIC0.9□□□□□ -2.27
GPC3P51654 MLLT10P1-201ENST00000418346 262 ntBASIC0.9□□□□□ -2.27
GPC3P51654 RNU6-351P-201ENST00000516097 100 ntBASIC0.9□□□□□ -2.27
GPC3P51654 RNU6-966P-201ENST00000516479 104 ntBASIC0.9□□□□□ -2.27
GPC3P51654 SNORD45.4-201ENST00000516629 73 ntBASIC0.9□□□□□ -2.27
GPC3P51654 DEFB117-201ENST00000602356 141 ntBASIC0.9□□□□□ -2.27
GPC3P51654 AC108706.1-201ENST00000611053 297 ntBASIC0.9□□□□□ -2.27
GPC3P51654 AC007485.1-201ENST00000616755 206 ntBASIC0.9□□□□□ -2.27
GPC3P51654 AC008163.1-202ENST00000636004 2889 ntBASIC0.89□□□□□ -2.27
GPC3P51654 MIR369-201ENST00000362155 70 ntBASIC0.89□□□□□ -2.27
GPC3P51654 SNORD81.1-201ENST00000363064 77 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.128-201ENST00000363391 112 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.172-201ENST00000363765 102 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.183-201ENST00000363882 113 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.203-201ENST00000364106 102 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.380-201ENST00000365663 111 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.383-201ENST00000383855 97 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.485-201ENST00000384395 102 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.509-201ENST00000384506 99 ntBASIC0.89□□□□□ -2.27
GPC3P51654 RNU6-101P-201ENST00000410323 104 ntBASIC0.89□□□□□ -2.27
GPC3P51654 AC004941.2-201ENST00000427009 228 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.631-201ENST00000459607 101 ntBASIC0.89□□□□□ -2.27
GPC3P51654 RPL23AP54-201ENST00000495129 419 ntBASIC0.89□□□□□ -2.27
GPC3P51654 SNORD111.1-201ENST00000516421 86 ntBASIC0.89□□□□□ -2.27
GPC3P51654 RNU7-115P-201ENST00000516433 55 ntBASIC0.89□□□□□ -2.27
GPC3P51654 RNU6-1116P-201ENST00000517269 99 ntBASIC0.89□□□□□ -2.27
GPC3P51654 AC136628.3-201ENST00000521868 290 ntBASIC0.89□□□□□ -2.27
GPC3P51654 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.89□□□□□ -2.27
GPC3P51654 AC127455.1-201ENST00000565496 145 ntBASIC0.89□□□□□ -2.27
GPC3P51654 MIR5000-201ENST00000577717 103 ntBASIC0.89□□□□□ -2.27
GPC3P51654 AC124312.5-201ENST00000604451 268 ntBASIC0.89□□□□□ -2.27
GPC3P51654 MIR548AY-201ENST00000617669 107 ntBASIC0.89□□□□□ -2.27
GPC3P51654 Y_RNA.28-201ENST00000362554 111 ntBASIC0.88□□□□□ -2.27
GPC3P51654 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
GPC3P51654 SNORD14E-201ENST00000364009 85 ntBASIC0.88□□□□□ -2.27
GPC3P51654 RNU5E-4P-201ENST00000364931 120 ntBASIC0.88□□□□□ -2.27
GPC3P51654 RNU6-867P-201ENST00000364956 107 ntBASIC0.88□□□□□ -2.27
GPC3P51654 MIR526A1-201ENST00000384897 85 ntBASIC0.88□□□□□ -2.27
GPC3P51654 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.88□□□□□ -2.27
GPC3P51654 RNU7-90P-201ENST00000459216 62 ntBASIC0.88□□□□□ -2.27
GPC3P51654 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
GPC3P51654 RNU7-43P-201ENST00000516554 64 ntBASIC0.88□□□□□ -2.27
GPC3P51654 Y_RNA.715-201ENST00000517082 110 ntBASIC0.88□□□□□ -2.27
GPC3P51654 DEFB108E-201ENST00000524692 240 ntBASIC0.88□□□□□ -2.27
GPC3P51654 AC024405.2-202ENST00000532731 184 ntBASIC0.88□□□□□ -2.27
GPC3P51654 C8orf59P2-201ENST00000603441 271 ntBASIC0.88□□□□□ -2.27
GPC3P51654 AC104695.3-201ENST00000604052 296 ntBASIC0.88□□□□□ -2.27
GPC3P51654 MIR376A1-201ENST00000616574 68 ntBASIC0.88□□□□□ -2.27
GPC3P51654 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.88□□□□□ -2.27
GPC3P51654 RNU4-90P-201ENST00000362773 141 ntBASIC0.87□□□□□ -2.27
GPC3P51654 RNY1-201ENST00000364228 113 ntBASIC0.87□□□□□ -2.27
GPC3P51654 Y_RNA.222-201ENST00000364264 102 ntBASIC0.87□□□□□ -2.27
GPC3P51654 SNORD38C-201ENST00000384381 69 ntBASIC0.87□□□□□ -2.27
GPC3P51654 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
GPC3P51654 MIR802-201ENST00000390235 94 ntBASIC0.87□□□□□ -2.27
GPC3P51654 MIR1252-201ENST00000408861 65 ntBASIC0.87□□□□□ -2.27
GPC3P51654 RNU4-30P-201ENST00000410245 143 ntBASIC0.87□□□□□ -2.27
GPC3P51654 RPS3AP1-201ENST00000413190 320 ntBASIC0.87□□□□□ -2.27
GPC3P51654 SNORA74.3-201ENST00000517108 154 ntBASIC0.87□□□□□ -2.27
GPC3P51654 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
GPC3P51654 Y_RNA.152-201ENST00000363578 100 ntBASIC0.86□□□□□ -2.27
GPC3P51654 RNU6-674P-201ENST00000363831 107 ntBASIC0.86□□□□□ -2.27
GPC3P51654 Y_RNA.363-201ENST00000365529 113 ntBASIC0.86□□□□□ -2.27
GPC3P51654 RNU6-969P-201ENST00000383900 105 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms