Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC023934.1-201ENST00000574529 2389 ntBASIC0.56□□□□□ -2.32
CASP4P49662 Y_RNA.331-201ENST00000365267 102 ntBASIC0.55□□□□□ -2.32
CASP4P49662 RNU6-442P-201ENST00000383968 104 ntBASIC0.55□□□□□ -2.32
CASP4P49662 Y_RNA.428-201ENST00000384078 102 ntBASIC0.55□□□□□ -2.32
CASP4P49662 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
CASP4P49662 AC091951.2-201ENST00000500762 203 ntBASIC0.55□□□□□ -2.32
CASP4P49662 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
CASP4P49662 AC024405.2-202ENST00000532731 184 ntBASIC0.55□□□□□ -2.32
CASP4P49662 AC127455.1-201ENST00000565496 145 ntBASIC0.55□□□□□ -2.32
CASP4P49662 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
CASP4P49662 Y_RNA.772-201ENST00000606692 102 ntBASIC0.55□□□□□ -2.32
CASP4P49662 RNU6-94P-201ENST00000607728 107 ntBASIC0.55□□□□□ -2.32
CASP4P49662 AL138825.1-201ENST00000618587 192 ntBASIC0.55□□□□□ -2.32
CASP4P49662 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.55□□□□□ -2.32
CASP4P49662 AC091925.1-201ENST00000623204 462 ntBASIC0.55□□□□□ -2.32
CASP4P49662 MIR4272-201ENST00000635924 64 ntBASIC0.55□□□□□ -2.32
CASP4P49662 MTND4LP32-201ENST00000636111 270 ntBASIC0.55□□□□□ -2.32
CASP4P49662 Y_RNA.116-201ENST00000363292 103 ntBASIC0.54□□□□□ -2.32
CASP4P49662 SNORD113.3-201ENST00000364630 78 ntBASIC0.54□□□□□ -2.32
CASP4P49662 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
CASP4P49662 Y_RNA.384-201ENST00000383909 102 ntBASIC0.54□□□□□ -2.32
CASP4P49662 SNORD116-29-201ENST00000384516 83 ntBASIC0.54□□□□□ -2.32
CASP4P49662 MIR802-201ENST00000390235 94 ntBASIC0.54□□□□□ -2.32
CASP4P49662 AL590004.1-201ENST00000405321 300 ntBASIC0.54□□□□□ -2.32
CASP4P49662 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.54□□□□□ -2.32
CASP4P49662 RNU6-830P-201ENST00000516353 107 ntBASIC0.54□□□□□ -2.32
CASP4P49662 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
CASP4P49662 SNORD116.3-201ENST00000517176 78 ntBASIC0.54□□□□□ -2.32
CASP4P49662 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.54□□□□□ -2.32
CASP4P49662 MIR5188-201ENST00000583467 113 ntBASIC0.54□□□□□ -2.32
CASP4P49662 DEFB117-201ENST00000602356 141 ntBASIC0.54□□□□□ -2.32
CASP4P49662 Y_RNA.142-201ENST00000363491 102 ntBASIC0.53□□□□□ -2.32
CASP4P49662 Y_RNA.148-201ENST00000363557 117 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RNU1-133P-201ENST00000364867 167 ntBASIC0.53□□□□□ -2.32
CASP4P49662 Y_RNA.463-201ENST00000384271 102 ntBASIC0.53□□□□□ -2.32
CASP4P49662 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.53□□□□□ -2.32
CASP4P49662 MIR1302-7-201ENST00000408841 72 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RNU6-613P-201ENST00000410412 108 ntBASIC0.53□□□□□ -2.32
CASP4P49662 AC138393.2-201ENST00000414742 246 ntBASIC0.53□□□□□ -2.32
CASP4P49662 AC005534.2-201ENST00000431047 433 ntBASIC0.53□□□□□ -2.32
CASP4P49662 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
CASP4P49662 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.53□□□□□ -2.32
CASP4P49662 RNU6-1132P-201ENST00000459214 107 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RPL23AP54-201ENST00000495129 419 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RNU6-277P-201ENST00000516272 106 ntBASIC0.53□□□□□ -2.32
CASP4P49662 RNU7-115P-201ENST00000516433 55 ntBASIC0.53□□□□□ -2.32
CASP4P49662 Y_RNA.718-201ENST00000517110 102 ntBASIC0.53□□□□□ -2.32
CASP4P49662 MIR548AR-201ENST00000582191 57 ntBASIC0.53□□□□□ -2.32
CASP4P49662 AC022709.1-201ENST00000615967 87 ntBASIC0.53□□□□□ -2.32
CASP4P49662 MIR548AY-201ENST00000617669 107 ntBASIC0.53□□□□□ -2.32
CASP4P49662 MIR6516-201ENST00000630554 81 ntBASIC0.53□□□□□ -2.32
CASP4P49662 AC099654.14-201ENST00000638599 341 ntBASIC0.53□□□□□ -2.32
CASP4P49662 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CASP4P49662 SNORD28B-201ENST00000390993 75 ntBASIC0.52□□□□□ -2.33
CASP4P49662 MIR1827-201ENST00000408549 66 ntBASIC0.52□□□□□ -2.33
CASP4P49662 AF228730.4-201ENST00000421457 183 ntBASIC0.52□□□□□ -2.33
CASP4P49662 RNA5SP220-201ENST00000516298 104 ntBASIC0.52□□□□□ -2.33
CASP4P49662 MIR2115-201ENST00000516657 100 ntBASIC0.52□□□□□ -2.33
CASP4P49662 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.52□□□□□ -2.33
CASP4P49662 AL355375.2-201ENST00000574825 175 ntBASIC0.52□□□□□ -2.33
CASP4P49662 MIR2681-201ENST00000581814 105 ntBASIC0.52□□□□□ -2.33
CASP4P49662 AC011373.1-201ENST00000607270 237 ntBASIC0.52□□□□□ -2.33
CASP4P49662 Pinc.1-201ENST00000616452 154 ntBASIC0.52□□□□□ -2.33
CASP4P49662 RNA5SP347-201ENST00000362445 119 ntBASIC0.51□□□□□ -2.33
CASP4P49662 SNORD81.1-201ENST00000363064 77 ntBASIC0.51□□□□□ -2.33
CASP4P49662 RNU6-1209P-201ENST00000363655 107 ntBASIC0.51□□□□□ -2.33
CASP4P49662 Y_RNA.796-201ENST00000364268 102 ntBASIC0.51□□□□□ -2.33
CASP4P49662 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
CASP4P49662 Y_RNA.242-201ENST00000364473 110 ntBASIC0.51□□□□□ -2.33
CASP4P49662 Y_RNA.799-201ENST00000364992 102 ntBASIC0.51□□□□□ -2.33
CASP4P49662 Y_RNA.354-201ENST00000365448 111 ntBASIC0.51□□□□□ -2.33
CASP4P49662 SNRPGP14-201ENST00000435400 219 ntBASIC0.51□□□□□ -2.33
CASP4P49662 RNU7-152P-201ENST00000458982 64 ntBASIC0.51□□□□□ -2.33
CASP4P49662 RNU4-54P-201ENST00000516428 129 ntBASIC0.51□□□□□ -2.33
CASP4P49662 RNU7-110P-201ENST00000516891 62 ntBASIC0.51□□□□□ -2.33
CASP4P49662 AC018659.1-201ENST00000551083 169 ntBASIC0.51□□□□□ -2.33
CASP4P49662 Z83818.1-201ENST00000603584 150 ntBASIC0.51□□□□□ -2.33
CASP4P49662 AL121655.1-201ENST00000605811 308 ntBASIC0.51□□□□□ -2.33
CASP4P49662 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.51□□□□□ -2.33
CASP4P49662 MIR6734-201ENST00000621166 68 ntBASIC0.51□□□□□ -2.33
CASP4P49662 MIR1302-1-201ENST00000637932 143 ntBASIC0.51□□□□□ -2.33
CASP4P49662 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.51□□□□□ -2.33
CASP4P49662 Y_RNA.39-201ENST00000362620 98 ntBASIC0.5□□□□□ -2.33
CASP4P49662 U8.7-201ENST00000364940 136 ntBASIC0.5□□□□□ -2.33
CASP4P49662 SNORA2B-201ENST00000384583 137 ntBASIC0.5□□□□□ -2.33
CASP4P49662 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
CASP4P49662 MTCO2P27-201ENST00000420740 428 ntBASIC0.5□□□□□ -2.33
CASP4P49662 HMGN1P10-201ENST00000474557 553 ntBASIC0.5□□□□□ -2.33
CASP4P49662 NDUFA4P2-201ENST00000489989 244 ntBASIC0.5□□□□□ -2.33
CASP4P49662 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.5□□□□□ -2.33
CASP4P49662 RNU6-1007P-201ENST00000516586 107 ntBASIC0.5□□□□□ -2.33
CASP4P49662 Y_RNA.713-201ENST00000517013 96 ntBASIC0.5□□□□□ -2.33
CASP4P49662 AC008507.4-201ENST00000585464 127 ntBASIC0.5□□□□□ -2.33
CASP4P49662 RPS29P30-201ENST00000600975 111 ntBASIC0.5□□□□□ -2.33
CASP4P49662 AL080274.1-201ENST00000605565 220 ntBASIC0.5□□□□□ -2.33
CASP4P49662 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
CASP4P49662 RNU6-1115P-201ENST00000362490 106 ntBASIC0.49□□□□□ -2.33
CASP4P49662 Y_RNA.168-201ENST00000363740 102 ntBASIC0.49□□□□□ -2.33
CASP4P49662 Y_RNA.187-201ENST00000363918 113 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 189 ms