Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 MIR4724-201ENST00000579485 89 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 AC242852.1-201ENST00000612151 96 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 AL591926.4-201ENST00000616895 298 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 AL365265.1-201ENST00000621045 234 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 AC244015.1-201ENST00000622301 99 ntBASIC1.39□□□□□ -2.19
NKX2-1P43699 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.39□□□□□ -2.19
NKX2-1P43699 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
NKX2-1P43699 RNU6-1209P-201ENST00000363655 107 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 Y_RNA.262-201ENST00000364641 102 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 Y_RNA.435-201ENST00000384095 112 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 Y_RNA.476-201ENST00000384347 108 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 MIR513A1-201ENST00000385138 129 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 MIR660-201ENST00000385235 97 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 RNU6-847P-201ENST00000411115 108 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 Y_RNA.700-201ENST00000516806 100 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 RNU6-111P-201ENST00000517179 105 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.38□□□□□ -2.19
NKX2-1P43699 MIR4298-201ENST00000584380 73 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.38□□□□□ -2.19
NKX2-1P43699 Y_RNA.60-201ENST00000362831 98 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 Y_RNA.269-201ENST00000364685 89 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 Y_RNA.336-201ENST00000365307 109 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNU6-1138P-201ENST00000365359 106 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNU6-1065P-201ENST00000384513 106 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 MIR653-201ENST00000385279 96 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 AC003989.2-201ENST00000440224 169 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 STAG3L5P-204ENST00000443759 179 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNU1-98P-201ENST00000458992 160 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 CYCTP-201ENST00000504253 315 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNU6-970P-201ENST00000516312 107 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 Y_RNA.679-201ENST00000516416 91 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNA5SP168-201ENST00000516642 112 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 RNU6-1271P-201ENST00000517049 105 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 AC110588.1-201ENST00000559699 137 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 AL391903.3-201ENST00000612158 163 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 MIR8063-201ENST00000621930 81 ntBASIC1.37□□□□□ -2.19
NKX2-1P43699 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
NKX2-1P43699 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
NKX2-1P43699 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
NKX2-1P43699 SNORD114-1-201ENST00000362705 72 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 Y_RNA.552-201ENST00000384665 112 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 MIR583-201ENST00000384846 75 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 MIR616-201ENST00000385293 97 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 Y_RNA.626-201ENST00000411288 95 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 SNRPGP10-201ENST00000432323 225 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.36□□□□□ -2.19
NKX2-1P43699 RPS29P11-201ENST00000496507 171 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
NKX2-1P43699 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 AL160236.1-201ENST00000556317 195 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 DEFB122-202ENST00000569013 197 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 AC104984.5-201ENST00000586878 94 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.36□□□□□ -2.19
NKX2-1P43699 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
NKX2-1P43699 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.35□□□□□ -2.19
NKX2-1P43699 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.35□□□□□ -2.19
NKX2-1P43699 Y_RNA.121-201ENST00000363309 113 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 MIR9-3-201ENST00000385084 90 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 RNU6-1228P-201ENST00000391014 107 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 U8.16-201ENST00000391279 133 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-1P43699 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-1P43699 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-1P43699 NDUFA4P2-201ENST00000489989 244 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.35□□□□□ -2.19
NKX2-1P43699 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.35□□□□□ -2.19
NKX2-1P43699 SNORD116-28-201ENST00000516123 91 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 RNU1-41P-201ENST00000516161 162 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 RNU6-830P-201ENST00000516353 107 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 RNU1-48P-201ENST00000516400 162 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 RNU6-794P-201ENST00000517261 64 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 MIR4662B-201ENST00000579498 81 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 JPX_2.1-201ENST00000614161 69 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 uc_338.4-201ENST00000616635 176 ntBASIC1.35□□□□□ -2.19
NKX2-1P43699 Y_RNA.54-201ENST00000362766 105 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 RNU6-103P-201ENST00000363686 107 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 SNORD27-201ENST00000363981 72 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 RNU6-131P-201ENST00000391144 107 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 RNU6-381P-201ENST00000391259 108 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.34□□□□□ -2.19
NKX2-1P43699 RN7SKP164-201ENST00000516138 266 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
NKX2-1P43699 AC008507.4-201ENST00000585464 127 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 AC120024.3-201ENST00000603167 156 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 Z83818.1-201ENST00000603584 150 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 AL121890.5-201ENST00000620848 304 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
NKX2-1P43699 AP000648.3-201ENST00000623539 4507 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 MIR367-201ENST00000362299 68 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 Y_RNA.200-201ENST00000364018 102 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 Y_RNA.293-201ENST00000364908 93 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 SNORD50B-201ENST00000364995 70 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 snoU2-30.1-201ENST00000365012 70 ntBASIC1.33□□□□□ -2.2
NKX2-1P43699 RNA5SP259-201ENST00000365541 109 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.4 ms