Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 SNORD115-30-201ENST00000364117 82 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 RNU6-580P-201ENST00000365159 107 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 RNU6-831P-201ENST00000384548 107 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 Y_RNA.573-201ENST00000384763 105 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 MIR604-201ENST00000384880 94 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 snoU13.11-201ENST00000459219 104 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 RPL17P19-201ENST00000489069 552 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 MIR4790-201ENST00000577799 79 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 AC012433.1-201ENST00000588916 398 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 AC005014.2-201ENST00000607795 599 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 AC015540.1-201ENST00000615828 501 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 AC092794.2-201ENST00000620933 563 ntBASIC0.16□□□□□ -2.38
COL18A1P39060 SNORA72-201ENST00000384339 132 ntBASIC0.15□□□□□ -2.39
COL18A1P39060 Y_RNA.537-201ENST00000384626 109 ntBASIC0.15□□□□□ -2.39
COL18A1P39060 RNU2-54P-201ENST00000410299 190 ntBASIC0.15□□□□□ -2.39
COL18A1P39060 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.15□□□□□ -2.39
COL18A1P39060 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.15□□□□□ -2.39
COL18A1P39060 RNA5SP67-201ENST00000516422 131 ntBASIC0.15□□□□□ -2.39
COL18A1P39060 RNU6-307P-201ENST00000516743 106 ntBASIC0.15□□□□□ -2.39
COL18A1P39060 SNORD114-31-201ENST00000363219 75 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNU6-1090P-201ENST00000364065 94 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MT-TN-201ENST00000387400 73 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 AL031003.1-201ENST00000404229 172 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.14□□□□□ -2.39
COL18A1P39060 MIR4768-201ENST00000585270 74 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIR101-1-201ENST00000362265 75 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIR18A-201ENST00000362310 71 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNU6-874P-201ENST00000362390 105 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNY3-201ENST00000365484 102 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 Y_RNA.376-201ENST00000365638 108 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNU6-442P-201ENST00000383968 104 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 Y_RNA.517-201ENST00000384551 106 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIR520F-201ENST00000384824 87 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIR573-201ENST00000384964 99 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNU6-710P-201ENST00000410424 105 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 Y_RNA.610-201ENST00000410681 103 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MTND1P29-201ENST00000448112 647 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIR2053-201ENST00000459295 91 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 SNORA68.3-201ENST00000515906 83 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 SNORA25.12-201ENST00000516202 82 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 RNU6-830P-201ENST00000516353 107 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 AP000753.3-201ENST00000604083 169 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 PISRT1.1-201ENST00000616930 107 ntBASIC0.14□□□□□ -2.39
COL18A1P39060 MIRLET7D-201ENST00000362263 87 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-349P-201ENST00000362402 107 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-961P-201ENST00000363893 105 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 Y_RNA.194-201ENST00000363985 102 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 SNORD14E-201ENST00000364009 85 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-192P-201ENST00000391253 100 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 U8.17-201ENST00000391292 132 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU2-61P-201ENST00000411069 191 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RPS29P8-201ENST00000445109 171 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-329P-201ENST00000459618 107 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 SCARNA8-201ENST00000515924 131 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-436P-201ENST00000516171 114 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-1007P-201ENST00000516586 107 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 Y_RNA.708-201ENST00000516950 96 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 AC024909.2-201ENST00000553035 286 ntBASIC0.13□□□□□ -2.39
COL18A1P39060 RNU6-626P-201ENST00000363354 107 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 SNORA1.2-201ENST00000365189 134 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 MIR520H-201ENST00000385126 88 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 SNORA69.1-201ENST00000390904 137 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.12□□□□□ -2.39
COL18A1P39060 Y_RNA.594-201ENST00000410373 140 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 MTND4P28-201ENST00000426217 387 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 MTATP6P17-201ENST00000431030 672 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 AC108740.1-201ENST00000498629 225 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 MTND5P5-201ENST00000503764 376 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 RNU4-49P-201ENST00000516080 140 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 RNU7-116P-201ENST00000516940 62 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 AC092634.7-201ENST00000621022 103 ntBASIC0.12□□□□□ -2.39
COL18A1P39060 SNORD44.1-201ENST00000363202 61 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 MIR518A1-201ENST00000385068 85 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.11□□□□□ -2.39
COL18A1P39060 FCF1P4-201ENST00000448326 183 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.11□□□□□ -2.39
COL18A1P39060 Y_RNA.101-201ENST00000363154 102 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 Y_RNA.242-201ENST00000364473 110 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 RNU6-1323P-201ENST00000384025 107 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 Y_RNA.482-201ENST00000384377 111 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 RNU6-679P-201ENST00000391003 106 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 MTCO2P33-201ENST00000402100 465 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 RNA5SP95-201ENST00000410319 137 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 AL353997.1-201ENST00000432936 108 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 SNORD57-201ENST00000448188 72 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 RNU7-56P-201ENST00000458744 62 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 PRDX4P1-201ENST00000507189 574 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 RNU6-1016P-201ENST00000516689 94 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 AC026407.1-201ENST00000518369 204 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 AC022523.2-201ENST00000561045 150 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 Y_RNA.757-201ENST00000578934 114 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 AC018638.8-201ENST00000588755 281 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 POLR3GP1-201ENST00000594073 261 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 JPX_2.1-201ENST00000614161 69 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 uc_338.4-201ENST00000616635 176 ntBASIC0.11□□□□□ -2.39
COL18A1P39060 Y_RNA.35-201ENST00000362601 101 ntBASIC0.1□□□□□ -2.39
COL18A1P39060 Y_RNA.89-201ENST00000363031 102 ntBASIC0.1□□□□□ -2.39
COL18A1P39060 SNORD118-201ENST00000363593 134 ntBASIC0.1□□□□□ -2.39
COL18A1P39060 Y_RNA.172-201ENST00000363765 102 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms