Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RN7SKP295-201ENST00000517264 153 ntBASIC0.57□□□□□ -2.32
RORAP35398 AL355073.2-201ENST00000612106 557 ntBASIC0.57□□□□□ -2.32
RORAP35398 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
RORAP35398 MIR6516-201ENST00000630554 81 ntBASIC0.57□□□□□ -2.32
RORAP35398 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
RORAP35398 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
RORAP35398 RNU6-490P-201ENST00000362985 107 ntBASIC0.56□□□□□ -2.32
RORAP35398 Y_RNA.390-201ENST00000383932 102 ntBASIC0.56□□□□□ -2.32
RORAP35398 SNORD89-201ENST00000390981 114 ntBASIC0.56□□□□□ -2.32
RORAP35398 U7.7-201ENST00000459276 60 ntBASIC0.56□□□□□ -2.32
RORAP35398 NDUFA4P2-201ENST00000489989 244 ntBASIC0.56□□□□□ -2.32
RORAP35398 MIR548AR-201ENST00000582191 57 ntBASIC0.56□□□□□ -2.32
RORAP35398 DEFB117-201ENST00000602356 141 ntBASIC0.56□□□□□ -2.32
RORAP35398 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.56□□□□□ -2.32
RORAP35398 MIR4272-201ENST00000635924 64 ntBASIC0.56□□□□□ -2.32
RORAP35398 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
RORAP35398 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.55□□□□□ -2.32
RORAP35398 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
RORAP35398 RNA5SP499-201ENST00000363982 119 ntBASIC0.55□□□□□ -2.32
RORAP35398 RNU6-1040P-201ENST00000383974 107 ntBASIC0.55□□□□□ -2.32
RORAP35398 Y_RNA.496-201ENST00000384444 101 ntBASIC0.55□□□□□ -2.32
RORAP35398 MIR628-201ENST00000385229 95 ntBASIC0.55□□□□□ -2.32
RORAP35398 RNY4P36-201ENST00000391116 96 ntBASIC0.55□□□□□ -2.32
RORAP35398 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.55□□□□□ -2.32
RORAP35398 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC138393.2-201ENST00000414742 246 ntBASIC0.55□□□□□ -2.32
RORAP35398 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.55□□□□□ -2.32
RORAP35398 AC092628.1-201ENST00000436250 252 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC099799.1-201ENST00000439809 192 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC010655.3-201ENST00000478818 450 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC024405.2-202ENST00000532731 184 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC006600.1-201ENST00000572529 153 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC025627.3-201ENST00000582078 182 ntBASIC0.55□□□□□ -2.32
RORAP35398 RN7SL793P-201ENST00000583259 296 ntBASIC0.55□□□□□ -2.32
RORAP35398 AP003357.1-201ENST00000604497 148 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC025253.1-201ENST00000613623 543 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC084781.2-201ENST00000615568 161 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC091925.1-201ENST00000623204 462 ntBASIC0.55□□□□□ -2.32
RORAP35398 AC008133.2-201ENST00000624540 351 ntBASIC0.55□□□□□ -2.32
RORAP35398 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.55□□□□□ -2.32
RORAP35398 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
RORAP35398 Y_RNA.203-201ENST00000364106 102 ntBASIC0.54□□□□□ -2.32
RORAP35398 Y_RNA.341-201ENST00000365341 102 ntBASIC0.54□□□□□ -2.32
RORAP35398 Y_RNA.463-201ENST00000384271 102 ntBASIC0.54□□□□□ -2.32
RORAP35398 MIR216A-201ENST00000385063 110 ntBASIC0.54□□□□□ -2.32
RORAP35398 RNA5SP95-201ENST00000410319 137 ntBASIC0.54□□□□□ -2.32
RORAP35398 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
RORAP35398 RBMX2P4-201ENST00000441256 376 ntBASIC0.54□□□□□ -2.32
RORAP35398 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.54□□□□□ -2.32
RORAP35398 AC005042.3-201ENST00000453230 174 ntBASIC0.54□□□□□ -2.32
RORAP35398 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.54□□□□□ -2.32
RORAP35398 Y_RNA.714-201ENST00000517065 90 ntBASIC0.54□□□□□ -2.32
RORAP35398 Y_RNA.718-201ENST00000517110 102 ntBASIC0.54□□□□□ -2.32
RORAP35398 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
RORAP35398 POLR3GP1-201ENST00000594073 261 ntBASIC0.54□□□□□ -2.32
RORAP35398 VN1R91P-201ENST00000594377 169 ntBASIC0.54□□□□□ -2.32
RORAP35398 AC010205.1-201ENST00000616668 449 ntBASIC0.54□□□□□ -2.32
RORAP35398 7SK.10-201ENST00000621414 298 ntBASIC0.54□□□□□ -2.32
RORAP35398 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
RORAP35398 U8.7-201ENST00000364940 136 ntBASIC0.53□□□□□ -2.32
RORAP35398 Y_RNA.456-201ENST00000384232 111 ntBASIC0.53□□□□□ -2.32
RORAP35398 MIR92A1-201ENST00000385233 78 ntBASIC0.53□□□□□ -2.32
RORAP35398 AC098614.3-201ENST00000438957 440 ntBASIC0.53□□□□□ -2.32
RORAP35398 AC067940.1-201ENST00000458411 300 ntBASIC0.53□□□□□ -2.32
RORAP35398 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
RORAP35398 RNU6-1110P-201ENST00000516462 101 ntBASIC0.53□□□□□ -2.32
RORAP35398 RNU11-2P-201ENST00000516898 142 ntBASIC0.53□□□□□ -2.32
RORAP35398 AC127455.1-201ENST00000565496 145 ntBASIC0.53□□□□□ -2.32
RORAP35398 MIR3145-201ENST00000580727 82 ntBASIC0.53□□□□□ -2.32
RORAP35398 AC104985.2-201ENST00000620598 500 ntBASIC0.53□□□□□ -2.32
RORAP35398 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.52□□□□□ -2.33
RORAP35398 RNU6-1115P-201ENST00000362490 106 ntBASIC0.52□□□□□ -2.33
RORAP35398 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
RORAP35398 MIR570-201ENST00000384917 97 ntBASIC0.52□□□□□ -2.33
RORAP35398 MIR7-2-201ENST00000384970 110 ntBASIC0.52□□□□□ -2.33
RORAP35398 RNU6-710P-201ENST00000410424 105 ntBASIC0.52□□□□□ -2.33
RORAP35398 RNU6-994P-201ENST00000410507 111 ntBASIC0.52□□□□□ -2.33
RORAP35398 AC244098.3-201ENST00000424803 96 ntBASIC0.52□□□□□ -2.33
RORAP35398 RNU7-115P-201ENST00000516433 55 ntBASIC0.52□□□□□ -2.33
RORAP35398 RNU7-116P-201ENST00000516940 62 ntBASIC0.52□□□□□ -2.33
RORAP35398 Z83818.1-201ENST00000603584 150 ntBASIC0.52□□□□□ -2.33
RORAP35398 AL136317.1-201ENST00000612653 226 ntBASIC0.52□□□□□ -2.33
RORAP35398 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
RORAP35398 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.52□□□□□ -2.33
RORAP35398 RNU6-369P-201ENST00000362515 102 ntBASIC0.51□□□□□ -2.33
RORAP35398 RNU6-1209P-201ENST00000363655 107 ntBASIC0.51□□□□□ -2.33
RORAP35398 SNORD14E-201ENST00000364009 85 ntBASIC0.51□□□□□ -2.33
RORAP35398 Y_RNA.259-201ENST00000364619 101 ntBASIC0.51□□□□□ -2.33
RORAP35398 Y_RNA.331-201ENST00000365267 102 ntBASIC0.51□□□□□ -2.33
RORAP35398 Y_RNA.387-201ENST00000383918 102 ntBASIC0.51□□□□□ -2.33
RORAP35398 Y_RNA.458-201ENST00000384240 102 ntBASIC0.51□□□□□ -2.33
RORAP35398 SNORD111-201ENST00000408139 94 ntBASIC0.51□□□□□ -2.33
RORAP35398 AC098934.3-201ENST00000430450 190 ntBASIC0.51□□□□□ -2.33
RORAP35398 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.51□□□□□ -2.33
RORAP35398 RNU7-152P-201ENST00000458982 64 ntBASIC0.51□□□□□ -2.33
RORAP35398 AC093027.1-201ENST00000546698 429 ntBASIC0.51□□□□□ -2.33
RORAP35398 AC005730.3-201ENST00000583067 366 ntBASIC0.51□□□□□ -2.33
RORAP35398 AL132765.2-201ENST00000610812 351 ntBASIC0.51□□□□□ -2.33
RORAP35398 AC133104.2-201ENST00000615272 193 ntBASIC0.51□□□□□ -2.33
RORAP35398 AC099654.14-201ENST00000638599 341 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms