Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
TNFSF4P23510 RNU6-442P-201ENST00000383968 104 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 AL451046.2-201ENST00000403074 277 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 RNA5SP338-201ENST00000410495 85 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 AC100767.1-201ENST00000528178 123 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 AC008507.4-201ENST00000585464 127 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
TNFSF4P23510 AL021707.8-201ENST00000609428 183 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 Y_RNA.783-201ENST00000613546 102 ntBASIC1.71□□□□□ -2.14
TNFSF4P23510 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
TNFSF4P23510 ZNF355P-201ENST00000427301 3216 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 Y_RNA.20-201ENST00000362479 113 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 Y_RNA.304-201ENST00000365011 112 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 MIR15B-201ENST00000385045 98 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 AL023284.1-201ENST00000403956 276 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 RNU6-651P-201ENST00000411040 105 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 RPS27P16-201ENST00000425758 201 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 AL021397.1-201ENST00000451806 248 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 RNU6-250P-201ENST00000516958 103 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 AL442067.1-201ENST00000613261 223 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 AC068700.1-201ENST00000565862 3754 ntBASIC1.7□□□□□ -2.14
TNFSF4P23510 RNU6-574P-201ENST00000384265 107 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 MIR626-201ENST00000385032 94 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TNFSF4P23510 MIR1298-201ENST00000408783 112 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.69□□□□□ -2.14
TNFSF4P23510 RNU6-917P-201ENST00000516294 104 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 AC012493.3-201ENST00000604494 112 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 uc_338.4-201ENST00000616635 176 ntBASIC1.69□□□□□ -2.14
TNFSF4P23510 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
TNFSF4P23510 SNORD114-1-201ENST00000362705 72 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 SNORD27-201ENST00000363981 72 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 RN7SL274P-201ENST00000492268 272 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 RNU6-1023P-201ENST00000516137 106 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 RNU1-41P-201ENST00000516161 162 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 RNU1-48P-201ENST00000516400 162 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.68□□□□□ -2.14
TNFSF4P23510 MIR4643-201ENST00000577473 78 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 MIR5002-201ENST00000584713 97 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 AL357312.1-201ENST00000603879 298 ntBASIC1.68□□□□□ -2.14
TNFSF4P23510 Y_RNA.24-201ENST00000362508 103 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 Y_RNA.262-201ENST00000364641 102 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 SNORD38C-201ENST00000384381 69 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 MIR526A1-201ENST00000384897 85 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 MIR136-201ENST00000385207 82 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 SNORD58.1-201ENST00000391313 66 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 RNU6-922P-201ENST00000516753 99 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 FAM106DP-201ENST00000586416 501 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 GHRLOS.1-201ENST00000610995 70 ntBASIC1.67□□□□□ -2.14
TNFSF4P23510 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.67□□□□□ -2.14
TNFSF4P23510 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
TNFSF4P23510 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
TNFSF4P23510 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
TNFSF4P23510 RNU4-10P-201ENST00000364383 140 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.292-201ENST00000364904 97 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.307-201ENST00000365022 117 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.447-201ENST00000384184 113 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.477-201ENST00000384352 108 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 AC015922.2-201ENST00000435593 184 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.673-201ENST00000516306 88 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 RNU6-126P-201ENST00000516685 103 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 AL512310.8-201ENST00000550183 120 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 MIR4662B-201ENST00000579498 81 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 MIR3128-201ENST00000581957 66 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 AL365265.1-201ENST00000621045 234 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.66□□□□□ -2.14
TNFSF4P23510 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.66□□□□□ -2.14
TNFSF4P23510 Y_RNA.76-201ENST00000362931 109 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 SNORA20.1-201ENST00000364790 130 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 RNA5SP160-201ENST00000364866 120 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 RNU6-1138P-201ENST00000365359 106 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 Y_RNA.401-201ENST00000383965 117 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 MIR583-201ENST00000384846 75 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 Y_RNA.618-201ENST00000410949 107 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFSF4P23510 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFSF4P23510 snoU13.26-201ENST00000459452 105 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 MTND1P19-201ENST00000511780 315 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 AC090142.3-201ENST00000519012 385 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.65□□□□□ -2.15
TNFSF4P23510 MIR3664-201ENST00000579074 99 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 AL049861.1-201ENST00000603130 150 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.65□□□□□ -2.15
TNFSF4P23510 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
TNFSF4P23510 Y_RNA.229-201ENST00000364347 113 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 MIR1261-201ENST00000408659 82 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 RNA5SP182-201ENST00000516064 82 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 SNORD116-28-201ENST00000516123 91 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 SNORD77.4-201ENST00000516158 81 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 RNU4-71P-201ENST00000516258 113 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 RNU7-149P-201ENST00000516739 59 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.64□□□□□ -2.15
TNFSF4P23510 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
TNFSF4P23510 Y_RNA.60-201ENST00000362831 98 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 Y_RNA.65-201ENST00000362846 100 ntBASIC1.63□□□□□ -2.15
TNFSF4P23510 RNU4-17P-201ENST00000365598 141 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms