Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 Y_RNA.639-201ENST00000458981 102 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 RNU7-43P-201ENST00000516554 64 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 SNORA74.3-201ENST00000517108 154 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 AC124312.5-201ENST00000604451 268 ntBASIC1.23□□□□□ -2.21
CAPN3P20807 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
CAPN3P20807 MIR200A-201ENST00000384875 90 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 MIR516B2-201ENST00000385190 85 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.22□□□□□ -2.21
CAPN3P20807 RNU6-988P-201ENST00000519081 107 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
CAPN3P20807 MIR151B-201ENST00000584249 96 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 MIR6788-201ENST00000618842 66 ntBASIC1.22□□□□□ -2.21
CAPN3P20807 MIR369-201ENST00000362155 70 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 SNORD42.2-201ENST00000365570 69 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 MIR520C-201ENST00000385005 87 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 RNU6-101P-201ENST00000410323 104 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 MTND4LP30-201ENST00000454092 297 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AC117454.1-201ENST00000491120 168 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.21□□□□□ -2.22
CAPN3P20807 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.21□□□□□ -2.22
CAPN3P20807 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.21□□□□□ -2.22
CAPN3P20807 HSPE1P19-201ENST00000603327 295 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AC104695.3-201ENST00000604052 296 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AL050343.2-201ENST00000607338 280 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AL096861.1-201ENST00000610899 123 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 AL391903.3-201ENST00000612158 163 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 MIR376A1-201ENST00000616574 68 ntBASIC1.21□□□□□ -2.22
CAPN3P20807 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.21□□□□□ -2.22
CAPN3P20807 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
CAPN3P20807 AL391516.1-201ENST00000554380 2449 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 RNA5SP48-201ENST00000363969 126 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 RNU6-442P-201ENST00000383968 104 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 RNU7-90P-201ENST00000459216 62 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 AC136628.3-201ENST00000521868 290 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.2□□□□□ -2.22
CAPN3P20807 MIR3145-201ENST00000580727 82 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 AL160413.1-201ENST00000622780 310 ntBASIC1.2□□□□□ -2.22
CAPN3P20807 MIR96-201ENST00000362288 78 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 Y_RNA.183-201ENST00000363882 113 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 SNORD50B-201ENST00000364995 70 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 SNORD114-24-201ENST00000365029 72 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 MIR520E-201ENST00000384867 87 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 Y_RNA.715-201ENST00000517082 110 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 AC136932.1-201ENST00000574771 208 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 MIR3660-201ENST00000584845 100 ntBASIC1.19□□□□□ -2.22
CAPN3P20807 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
CAPN3P20807 RNU4-90P-201ENST00000362773 141 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 SNORD113-8-201ENST00000363497 74 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 U8.7-201ENST00000364940 136 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 SNORA40.6-201ENST00000391153 128 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 AC023449.1-201ENST00000454464 154 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 SNORA18.7-201ENST00000516910 131 ntBASIC1.18□□□□□ -2.22
CAPN3P20807 RNU6-1067P-201ENST00000384752 107 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 Y_RNA.631-201ENST00000459607 101 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 RPS29P1-201ENST00000465274 159 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 OR2A41P-201ENST00000473586 105 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 AC037487.3-201ENST00000606668 112 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 PART1_1.1-201ENST00000611761 217 ntBASIC1.17□□□□□ -2.22
CAPN3P20807 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CAPN3P20807 RNU4-80P-201ENST00000363200 141 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 RNU6-674P-201ENST00000363831 107 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 Y_RNA.205-201ENST00000364128 113 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 Y_RNA.389-201ENST00000383924 113 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 Y_RNA.419-201ENST00000384041 102 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 SNORA72.4-201ENST00000384174 132 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 MIR1252-201ENST00000408861 65 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 SNORA36B-201ENST00000410438 131 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 RNU6-130P-201ENST00000411112 103 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 COX6CP14-201ENST00000469580 174 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 SNORA40.15-201ENST00000516884 107 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 MIR4764-201ENST00000580680 88 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 MIR4300-201ENST00000581016 96 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 PRELID3BP2-201ENST00000605362 201 ntBASIC1.16□□□□□ -2.22
CAPN3P20807 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
CAPN3P20807 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.22
CAPN3P20807 MIR103A2-201ENST00000362154 78 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 Y_RNA.28-201ENST00000362554 111 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 RNA5SP264-201ENST00000363115 107 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 RNU6-899P-201ENST00000363947 107 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 Y_RNA.380-201ENST00000365663 111 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 Y_RNA.393-201ENST00000383936 102 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 Y_RNA.509-201ENST00000384506 99 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 MRPL35P3-201ENST00000421557 364 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 RNU7-141P-201ENST00000459304 62 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 RNU7-21P-201ENST00000459430 62 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 SNORD123-201ENST00000459473 70 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.15□□□□□ -2.23
CAPN3P20807 RN7SKP179-201ENST00000516126 217 ntBASIC1.15□□□□□ -2.23
CAPN3P20807 Y_RNA.128-201ENST00000363391 112 ntBASIC1.14□□□□□ -2.23
CAPN3P20807 Y_RNA.136-201ENST00000363444 102 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms