Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC091544.4-201ENST00000555268 342 ntBASIC2.99□□□□□ -1.93
LIG1P18858 AL591926.4-201ENST00000616895 298 ntBASIC2.99□□□□□ -1.93
LIG1P18858 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.98□□□□□ -1.93
LIG1P18858 SNORA3A-201ENST00000364113 130 ntBASIC2.98□□□□□ -1.93
LIG1P18858 SNORD114-6-201ENST00000364393 72 ntBASIC2.98□□□□□ -1.93
LIG1P18858 SNORA25B-201ENST00000365507 128 ntBASIC2.98□□□□□ -1.93
LIG1P18858 MIR548A1-201ENST00000385041 97 ntBASIC2.98□□□□□ -1.93
LIG1P18858 MIR522-201ENST00000385071 87 ntBASIC2.98□□□□□ -1.93
LIG1P18858 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.98□□□□□ -1.93
LIG1P18858 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.98□□□□□ -1.93
LIG1P18858 SCARNA15-202ENST00000516881 127 ntBASIC2.98□□□□□ -1.93
LIG1P18858 AC024995.1-201ENST00000523014 93 ntBASIC2.98□□□□□ -1.93
LIG1P18858 AP002004.2-201ENST00000531656 154 ntBASIC2.98□□□□□ -1.93
LIG1P18858 RNU6-1255P-201ENST00000363434 112 ntBASIC2.97□□□□□ -1.93
LIG1P18858 DEFA7P-201ENST00000382676 285 ntBASIC2.97□□□□□ -1.93
LIG1P18858 Y_RNA.510-201ENST00000384511 114 ntBASIC2.97□□□□□ -1.93
LIG1P18858 RNA5SP21-201ENST00000410917 96 ntBASIC2.97□□□□□ -1.93
LIG1P18858 ATP5J2P3-201ENST00000451550 258 ntBASIC2.97□□□□□ -1.93
LIG1P18858 AL049830.1-201ENST00000468034 425 ntBASIC2.97□□□□□ -1.93
LIG1P18858 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.97□□□□□ -1.93
LIG1P18858 RNA5SP282-201ENST00000516355 108 ntBASIC2.97□□□□□ -1.93
LIG1P18858 MIR203B-201ENST00000636080 86 ntBASIC2.97□□□□□ -1.93
LIG1P18858 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIG1P18858 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LIG1P18858 AC008555.8-201ENST00000623602 2168 ntBASIC2.97□□□□□ -1.93
LIG1P18858 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LIG1P18858 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.93
LIG1P18858 MIR518F-201ENST00000384973 87 ntBASIC2.96□□□□□ -1.94
LIG1P18858 RNA5SP89-201ENST00000410300 108 ntBASIC2.96□□□□□ -1.94
LIG1P18858 RNA5SP136-201ENST00000410906 107 ntBASIC2.96□□□□□ -1.94
LIG1P18858 RNA5SP184-201ENST00000411071 108 ntBASIC2.96□□□□□ -1.94
LIG1P18858 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.96□□□□□ -1.94
LIG1P18858 RNU6-168P-201ENST00000516189 101 ntBASIC2.96□□□□□ -1.94
LIG1P18858 RNU6-1149P-201ENST00000516810 97 ntBASIC2.96□□□□□ -1.94
LIG1P18858 AC006023.1-201ENST00000603944 259 ntBASIC2.96□□□□□ -1.94
LIG1P18858 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIG1P18858 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
LIG1P18858 AC062016.1-201ENST00000355719 319 ntBASIC2.95□□□□□ -1.94
LIG1P18858 SNORA1B-201ENST00000362535 133 ntBASIC2.95□□□□□ -1.94
LIG1P18858 RNU6-859P-201ENST00000362728 107 ntBASIC2.95□□□□□ -1.94
LIG1P18858 Y_RNA.528-201ENST00000384575 108 ntBASIC2.95□□□□□ -1.94
LIG1P18858 RNU6-160P-201ENST00000384591 107 ntBASIC2.95□□□□□ -1.94
LIG1P18858 RNA5SP323-201ENST00000391094 133 ntBASIC2.95□□□□□ -1.94
LIG1P18858 MIR1263-201ENST00000408324 86 ntBASIC2.95□□□□□ -1.94
LIG1P18858 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.95□□□□□ -1.94
LIG1P18858 MIR6895-201ENST00000613497 78 ntBASIC2.95□□□□□ -1.94
LIG1P18858 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
LIG1P18858 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.94□□□□□ -1.94
LIG1P18858 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LIG1P18858 SNORA33-201ENST00000363664 130 ntBASIC2.94□□□□□ -1.94
LIG1P18858 Y_RNA.281-201ENST00000364774 94 ntBASIC2.94□□□□□ -1.94
LIG1P18858 SNORA8-201ENST00000384574 139 ntBASIC2.94□□□□□ -1.94
LIG1P18858 MIR144-201ENST00000384886 86 ntBASIC2.94□□□□□ -1.94
LIG1P18858 CST2P1-201ENST00000425770 87 ntBASIC2.94□□□□□ -1.94
LIG1P18858 CALM2P4-201ENST00000430810 426 ntBASIC2.94□□□□□ -1.94
LIG1P18858 AL109933.2-201ENST00000452651 260 ntBASIC2.94□□□□□ -1.94
LIG1P18858 UBE2DNL-203ENST00000474922 222 ntBASIC2.94□□□□□ -1.94
LIG1P18858 RNU6-412P-201ENST00000516434 106 ntBASIC2.94□□□□□ -1.94
LIG1P18858 SNORA31.11-201ENST00000516528 139 ntBASIC2.94□□□□□ -1.94
LIG1P18858 RNA5SP82-201ENST00000516707 92 ntBASIC2.94□□□□□ -1.94
LIG1P18858 MIR5197-201ENST00000583721 112 ntBASIC2.94□□□□□ -1.94
LIG1P18858 MIR4762-201ENST00000585261 75 ntBASIC2.94□□□□□ -1.94
LIG1P18858 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.94□□□□□ -1.94
LIG1P18858 AC006441.5-201ENST00000612680 209 ntBASIC2.94□□□□□ -1.94
LIG1P18858 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.94□□□□□ -1.94
LIG1P18858 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LIG1P18858 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.94□□□□□ -1.94
LIG1P18858 AC007336.1-201ENST00000576365 3828 ntBASIC2.94□□□□□ -1.94
LIG1P18858 RNU1-91P-201ENST00000364746 163 ntBASIC2.93□□□□□ -1.94
LIG1P18858 Y_RNA.410-201ENST00000383992 113 ntBASIC2.93□□□□□ -1.94
LIG1P18858 RN7SKP284-201ENST00000411002 343 ntBASIC2.93□□□□□ -1.94
LIG1P18858 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.93□□□□□ -1.94
LIG1P18858 AL137067.1-201ENST00000615933 120 ntBASIC2.93□□□□□ -1.94
LIG1P18858 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
LIG1P18858 MIR6073-201ENST00000352083 89 ntBASIC2.92□□□□□ -1.94
LIG1P18858 U8.5-201ENST00000364528 136 ntBASIC2.92□□□□□ -1.94
LIG1P18858 AL031737.1-201ENST00000450125 223 ntBASIC2.92□□□□□ -1.94
LIG1P18858 RPS26P48-201ENST00000491713 339 ntBASIC2.92□□□□□ -1.94
LIG1P18858 AL163195.1-201ENST00000496941 348 ntBASIC2.92□□□□□ -1.94
LIG1P18858 Y_RNA.694-201ENST00000516677 117 ntBASIC2.92□□□□□ -1.94
LIG1P18858 MIR5694-201ENST00000581190 76 ntBASIC2.92□□□□□ -1.94
LIG1P18858 AC022217.4-201ENST00000604389 163 ntBASIC2.92□□□□□ -1.94
LIG1P18858 U4atac.1-201ENST00000618345 95 ntBASIC2.92□□□□□ -1.94
LIG1P18858 AC134878.1-201ENST00000619901 243 ntBASIC2.92□□□□□ -1.94
LIG1P18858 MIR376A2-201ENST00000636782 80 ntBASIC2.92□□□□□ -1.94
LIG1P18858 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
LIG1P18858 Y_RNA.116-201ENST00000363292 103 ntBASIC2.91□□□□□ -1.94
LIG1P18858 MIR570-201ENST00000384917 97 ntBASIC2.91□□□□□ -1.94
LIG1P18858 SNORD23.1-201ENST00000408212 104 ntBASIC2.91□□□□□ -1.94
LIG1P18858 MIR1262-201ENST00000408276 93 ntBASIC2.91□□□□□ -1.94
LIG1P18858 RNA5SP181-201ENST00000410246 98 ntBASIC2.91□□□□□ -1.94
LIG1P18858 RNA5SP270-201ENST00000411361 118 ntBASIC2.91□□□□□ -1.94
LIG1P18858 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.91□□□□□ -1.94
LIG1P18858 AC009238.1-201ENST00000442165 424 ntBASIC2.91□□□□□ -1.94
LIG1P18858 AC009237.6-201ENST00000446969 424 ntBASIC2.91□□□□□ -1.94
LIG1P18858 COX6CP6-201ENST00000490840 228 ntBASIC2.91□□□□□ -1.94
LIG1P18858 AL137847.3-201ENST00000611521 109 ntBASIC2.91□□□□□ -1.94
LIG1P18858 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.91□□□□□ -1.94
LIG1P18858 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
LIG1P18858 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms