Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 Y_RNA.222-201ENST00000364264 102 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 Y_RNA.418-201ENST00000384029 102 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 MIR136-201ENST00000385207 82 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 SNORD12-201ENST00000391002 90 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 RNU2-14P-201ENST00000411053 191 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 AC063976.4-201ENST00000421971 163 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 AC002429.1-201ENST00000437672 148 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 RPS29P28-201ENST00000446439 141 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 HSPE1P25-201ENST00000455484 251 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 RPS26P48-201ENST00000491713 339 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 Y_RNA.714-201ENST00000517065 90 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.1□□□□□ -2.23
ERCC2P18074 MIR3171-201ENST00000584270 74 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
ERCC2P18074 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.1□□□□□ -2.23
ERCC2P18074 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ERCC2P18074 Y_RNA.105-201ENST00000363182 111 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 MIR19B1-201ENST00000384829 87 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
ERCC2P18074 RNU7-141P-201ENST00000459304 62 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 Y_RNA.676-201ENST00000516393 96 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 SNORA74.3-201ENST00000517108 154 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 AC136628.3-201ENST00000521868 290 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.09□□□□□ -2.23
ERCC2P18074 AC020661.2-201ENST00000560114 134 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 PRELID3BP2-201ENST00000605362 201 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 SNORD114-21-201ENST00000606412 72 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 AL391903.3-201ENST00000612158 163 ntBASIC1.09□□□□□ -2.23
ERCC2P18074 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
ERCC2P18074 Y_RNA.158-201ENST00000363651 101 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 RNU6-801P-201ENST00000364087 105 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 Y_RNA.380-201ENST00000365663 111 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 SNORA72.4-201ENST00000384174 132 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 Y_RNA.527-201ENST00000384573 102 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 RNU6-1248P-201ENST00000391096 64 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 RNU6-121P-201ENST00000410525 99 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 MRPL35P3-201ENST00000421557 364 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 HMGN2P32-201ENST00000444648 269 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 AC245047.8-201ENST00000456455 284 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 AC087343.1-201ENST00000477341 475 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 RNU6-496P-201ENST00000516145 99 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 RNU6-191P-201ENST00000516295 94 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 SNORA18.7-201ENST00000516910 131 ntBASIC1.08□□□□□ -2.24
ERCC2P18074 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.08□□□□□ -2.24
ERCC2P18074 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.08□□□□□ -2.24
ERCC2P18074 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.07□□□□□ -2.24
ERCC2P18074 AC134026.1-201ENST00000623249 2239 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 RNU4-90P-201ENST00000362773 141 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 Y_RNA.569-201ENST00000384749 103 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 MIR520C-201ENST00000385005 87 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 SNORA26.5-201ENST00000391215 123 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 SNORA36B-201ENST00000410438 131 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
ERCC2P18074 SNORA40.15-201ENST00000516884 107 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 JPX_2.1-201ENST00000614161 69 ntBASIC1.07□□□□□ -2.24
ERCC2P18074 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 Y_RNA.455-201ENST00000384230 98 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 SNORA75.2-201ENST00000391138 150 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 SNORA75.3-201ENST00000391231 150 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 ELOCP20-201ENST00000422460 345 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 COX6CP14-201ENST00000469580 174 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 AC131281.1-201ENST00000522984 164 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 AC113195.1-201ENST00000579952 141 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 MIR4680-201ENST00000580906 66 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.06□□□□□ -2.24
ERCC2P18074 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.06□□□□□ -2.24
ERCC2P18074 HSPE1P19-201ENST00000603327 295 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 AC008163.1-202ENST00000636004 2889 ntBASIC1.06□□□□□ -2.24
ERCC2P18074 Y_RNA.136-201ENST00000363444 102 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 SNORD14E-201ENST00000364009 85 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 Y_RNA.214-201ENST00000364201 112 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 Y_RNA.796-201ENST00000364268 102 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 Y_RNA.799-201ENST00000364992 102 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNU6-969P-201ENST00000383900 105 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 MIR15B-201ENST00000385045 98 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 Y_RNA.581-201ENST00000391017 97 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 MTCO2P33-201ENST00000402100 465 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 MIR1278-201ENST00000408753 81 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNU6-437P-201ENST00000459408 95 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNU7-21P-201ENST00000459430 62 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 SNORD124-201ENST00000459577 104 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 AC098869.1-201ENST00000481627 292 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNU7-41P-201ENST00000515917 61 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNY3P15-201ENST00000516297 97 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 RNU6-764P-201ENST00000516396 105 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 AC005357.1-201ENST00000588399 301 ntBASIC1.05□□□□□ -2.24
ERCC2P18074 Y_RNA.19-201ENST00000362462 99 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 RNU6-770P-201ENST00000363929 105 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 Y_RNA.210-201ENST00000364161 110 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.04□□□□□ -2.24
ERCC2P18074 MTCO1P5-201ENST00000433573 344 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 NDUFA4P2-201ENST00000489989 244 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.04□□□□□ -2.24
ERCC2P18074 MRPS35P2-201ENST00000508242 191 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 Y_RNA.701-201ENST00000516812 110 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 MIR4764-201ENST00000580680 88 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.04□□□□□ -2.24
ERCC2P18074 AL356055.1-201ENST00000602528 446 ntBASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 246.1 ms