Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 U6.48-201ENST00000618523 106 ntBASIC-2.47□□□□□ -2.8
VCANP13611 RNU6-865P-201ENST00000364772 107 ntBASIC-2.47□□□□□ -2.81
VCANP13611 SNORD38B-201ENST00000384690 67 ntBASIC-2.47□□□□□ -2.81
VCANP13611 RNU6-1242P-201ENST00000391052 103 ntBASIC-2.47□□□□□ -2.81
VCANP13611 RPS3AP3-201ENST00000411933 242 ntBASIC-2.47□□□□□ -2.81
VCANP13611 AC025459.1-201ENST00000504072 156 ntBASIC-2.47□□□□□ -2.81
VCANP13611 RNU6-622P-201ENST00000384272 103 ntBASIC-2.48□□□□□ -2.81
VCANP13611 AL603914.1-201ENST00000401964 204 ntBASIC-2.48□□□□□ -2.81
VCANP13611 AC013262.1-201ENST00000426710 252 ntBASIC-2.48□□□□□ -2.81
VCANP13611 RNU6-958P-201ENST00000516995 106 ntBASIC-2.48□□□□□ -2.81
VCANP13611 MIR548AY-201ENST00000617669 107 ntBASIC-2.48□□□□□ -2.81
VCANP13611 MIRLET7C-201ENST00000362160 84 ntBASIC-2.48□□□□□ -2.81
VCANP13611 SCARNA17.3-201ENST00000516381 125 ntBASIC-2.48□□□□□ -2.81
VCANP13611 RNU6-971P-201ENST00000516920 106 ntBASIC-2.48□□□□□ -2.81
VCANP13611 RNU7-161P-201ENST00000517289 62 ntBASIC-2.48□□□□□ -2.81
VCANP13611 AL008636.1-201ENST00000625038 1018 ntBASIC-2.48□□□□□ -2.81
VCANP13611 snoU2_19.2-201ENST00000363024 80 ntBASIC-2.49□□□□□ -2.81
VCANP13611 RNU6-80P-201ENST00000384195 107 ntBASIC-2.49□□□□□ -2.81
VCANP13611 RNU6-658P-201ENST00000384606 106 ntBASIC-2.49□□□□□ -2.81
VCANP13611 RNU6-21P-201ENST00000384710 107 ntBASIC-2.49□□□□□ -2.81
VCANP13611 AC007283.2-201ENST00000424739 197 ntBASIC-2.49□□□□□ -2.81
VCANP13611 AC091951.3-201ENST00000504093 246 ntBASIC-2.49□□□□□ -2.81
VCANP13611 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-2.49□□□□□ -2.81
VCANP13611 AC138649.3-201ENST00000622154 254 ntBASIC-2.49□□□□□ -2.81
VCANP13611 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-2.49□□□□□ -2.81
VCANP13611 Y_RNA.179-201ENST00000363844 90 ntBASIC-2.5□□□□□ -2.81
VCANP13611 RNU6-1175P-201ENST00000365200 107 ntBASIC-2.5□□□□□ -2.81
VCANP13611 SNORD115-31-201ENST00000365318 82 ntBASIC-2.5□□□□□ -2.81
VCANP13611 RNU6-665P-201ENST00000384639 107 ntBASIC-2.5□□□□□ -2.81
VCANP13611 RNU2-47P-201ENST00000410649 186 ntBASIC-2.5□□□□□ -2.81
VCANP13611 MIR548AE1-201ENST00000583292 70 ntBASIC-2.5□□□□□ -2.81
VCANP13611 AL133255.1-201ENST00000606374 441 ntBASIC-2.5□□□□□ -2.81
VCANP13611 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-2.5□□□□□ -2.81
VCANP13611 AP001033.2-201ENST00000609701 1003 ntBASIC-2.5□□□□□ -2.81
VCANP13611 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-2.5□□□□□ -2.81
VCANP13611 AC068880.4-201ENST00000623082 495 ntBASIC-2.5□□□□□ -2.81
VCANP13611 SNORD93-201ENST00000408813 74 ntBASIC-2.5□□□□□ -2.81
VCANP13611 RNU7-74P-201ENST00000459104 62 ntBASIC-2.5□□□□□ -2.81
VCANP13611 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC-2.51□□□□□ -2.81
VCANP13611 RPL39P25-201ENST00000449384 154 ntBASIC-2.51□□□□□ -2.81
VCANP13611 AL121655.1-201ENST00000605811 308 ntBASIC-2.51□□□□□ -2.81
VCANP13611 AC005002.2-201ENST00000438228 269 ntBASIC-2.51□□□□□ -2.81
VCANP13611 RNU6-765P-201ENST00000516916 99 ntBASIC-2.51□□□□□ -2.81
VCANP13611 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC-2.51□□□□□ -2.81
VCANP13611 AC011373.1-201ENST00000607270 237 ntBASIC-2.51□□□□□ -2.81
VCANP13611 RNU6-245P-201ENST00000384020 107 ntBASIC-2.52□□□□□ -2.81
VCANP13611 MTCO1P31-201ENST00000506355 492 ntBASIC-2.52□□□□□ -2.81
VCANP13611 RNU6-703P-201ENST00000516946 107 ntBASIC-2.52□□□□□ -2.81
VCANP13611 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-2.52□□□□□ -2.81
VCANP13611 AC008494.2-201ENST00000514544 370 ntBASIC-2.52□□□□□ -2.81
VCANP13611 RNU6-1116P-201ENST00000517269 99 ntBASIC-2.52□□□□□ -2.81
VCANP13611 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-2.52□□□□□ -2.81
VCANP13611 SNORD115-6-201ENST00000363942 82 ntBASIC-2.52□□□□□ -2.81
VCANP13611 RNU6-336P-201ENST00000364891 107 ntBASIC-2.52□□□□□ -2.81
VCANP13611 RNU6-131P-201ENST00000391144 107 ntBASIC-2.52□□□□□ -2.81
VCANP13611 GPM6BP2-201ENST00000432046 144 ntBASIC-2.52□□□□□ -2.81
VCANP13611 GPM6BP1-201ENST00000446387 144 ntBASIC-2.52□□□□□ -2.81
VCANP13611 YWHAEP2-201ENST00000580066 112 ntBASIC-2.52□□□□□ -2.81
VCANP13611 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-2.52□□□□□ -2.81
VCANP13611 Y_RNA.296-201ENST00000364930 108 ntBASIC-2.53□□□□□ -2.81
VCANP13611 RNU6-1286P-201ENST00000383871 107 ntBASIC-2.53□□□□□ -2.81
VCANP13611 RNU6-949P-201ENST00000384040 107 ntBASIC-2.53□□□□□ -2.81
VCANP13611 MIR15B-201ENST00000385045 98 ntBASIC-2.53□□□□□ -2.81
VCANP13611 MIR516B2-201ENST00000385190 85 ntBASIC-2.53□□□□□ -2.81
VCANP13611 RNU6-1098P-201ENST00000516772 96 ntBASIC-2.53□□□□□ -2.81
VCANP13611 AC104073.3-201ENST00000610942 955 ntBASIC-2.53□□□□□ -2.81
VCANP13611 MIR452-201ENST00000385020 85 ntBASIC-2.53□□□□□ -2.81
VCANP13611 RNU6-1069P-201ENST00000516612 133 ntBASIC-2.53□□□□□ -2.81
VCANP13611 MTND5P40-201ENST00000559945 246 ntBASIC-2.53□□□□□ -2.81
VCANP13611 AC087683.1-201ENST00000591187 441 ntBASIC-2.53□□□□□ -2.81
VCANP13611 MIR6082-201ENST00000613604 109 ntBASIC-2.53□□□□□ -2.81
VCANP13611 AC027279.3-201ENST00000625055 122 ntBASIC-2.53□□□□□ -2.81
VCANP13611 RNU6-1115P-201ENST00000362490 106 ntBASIC-2.53□□□□□ -2.82
VCANP13611 Y_RNA.253-201ENST00000364562 112 ntBASIC-2.53□□□□□ -2.82
VCANP13611 MT-TF-201ENST00000387314 71 ntBASIC-2.53□□□□□ -2.82
VCANP13611 MIR5683-201ENST00000636514 76 ntBASIC-2.53□□□□□ -2.82
VCANP13611 RNU6-828P-201ENST00000364876 107 ntBASIC-2.54□□□□□ -2.82
VCANP13611 Y_RNA.407-201ENST00000383986 113 ntBASIC-2.54□□□□□ -2.82
VCANP13611 Y_RNA.440-201ENST00000384120 114 ntBASIC-2.54□□□□□ -2.82
VCANP13611 AL354751.2-201ENST00000415471 210 ntBASIC-2.54□□□□□ -2.82
VCANP13611 AL512347.1-201ENST00000566420 503 ntBASIC-2.54□□□□□ -2.82
VCANP13611 AL138889.2-201ENST00000603883 242 ntBASIC-2.54□□□□□ -2.82
VCANP13611 RNU6-563P-201ENST00000364872 108 ntBASIC-2.54□□□□□ -2.82
VCANP13611 RNU6-596P-201ENST00000365395 98 ntBASIC-2.54□□□□□ -2.82
VCANP13611 MIR136-201ENST00000385207 82 ntBASIC-2.54□□□□□ -2.82
VCANP13611 AP002795.1-201ENST00000534879 84 ntBASIC-2.54□□□□□ -2.82
VCANP13611 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-2.54□□□□□ -2.82
VCANP13611 AC103996.1-201ENST00000555468 102 ntBASIC-2.54□□□□□ -2.82
VCANP13611 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU6-708P-201ENST00000384217 107 ntBASIC-2.55□□□□□ -2.82
VCANP13611 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.55□□□□□ -2.82
VCANP13611 AL157770.1-201ENST00000623049 439 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU6-766P-201ENST00000362478 107 ntBASIC-2.55□□□□□ -2.82
VCANP13611 MIR652-201ENST00000385278 98 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU7-104P-201ENST00000459398 79 ntBASIC-2.55□□□□□ -2.82
VCANP13611 Y_RNA.709-201ENST00000516952 92 ntBASIC-2.55□□□□□ -2.82
VCANP13611 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC-2.55□□□□□ -2.82
VCANP13611 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC-2.55□□□□□ -2.82
VCANP13611 RNU6-800P-201ENST00000384473 103 ntBASIC-2.55□□□□□ -2.82
VCANP13611 MIR525-201ENST00000384978 85 ntBASIC-2.55□□□□□ -2.82
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms