Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.07□□□□□ -2.24
KRT3P12035 MIR4498-201ENST00000577599 66 ntBASIC1.07□□□□□ -2.24
KRT3P12035 HSPE1P19-201ENST00000603327 295 ntBASIC1.07□□□□□ -2.24
KRT3P12035 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.07□□□□□ -2.24
KRT3P12035 Y_RNA.19-201ENST00000362462 99 ntBASIC1.06□□□□□ -2.24
KRT3P12035 RNU6-1209P-201ENST00000363655 107 ntBASIC1.06□□□□□ -2.24
KRT3P12035 Y_RNA.202-201ENST00000364083 110 ntBASIC1.06□□□□□ -2.24
KRT3P12035 MIR520C-201ENST00000385005 87 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT3P12035 Y_RNA.638-201ENST00000459374 113 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AC098869.1-201ENST00000481627 292 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT3P12035 Y_RNA.711-201ENST00000516993 102 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AC136628.3-201ENST00000521868 290 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AC127455.1-201ENST00000565496 145 ntBASIC1.06□□□□□ -2.24
KRT3P12035 RPL23AP91-201ENST00000569211 455 ntBASIC1.06□□□□□ -2.24
KRT3P12035 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.06□□□□□ -2.24
KRT3P12035 MIR4762-201ENST00000585261 75 ntBASIC1.06□□□□□ -2.24
KRT3P12035 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.06□□□□□ -2.24
KRT3P12035 RNU4-38P-201ENST00000364472 129 ntBASIC1.05□□□□□ -2.24
KRT3P12035 RNU6-392P-201ENST00000364926 101 ntBASIC1.05□□□□□ -2.24
KRT3P12035 Y_RNA.418-201ENST00000384029 102 ntBASIC1.05□□□□□ -2.24
KRT3P12035 RNU6-514P-201ENST00000384208 107 ntBASIC1.05□□□□□ -2.24
KRT3P12035 Y_RNA.455-201ENST00000384230 98 ntBASIC1.05□□□□□ -2.24
KRT3P12035 RNU6-437P-201ENST00000459408 95 ntBASIC1.05□□□□□ -2.24
KRT3P12035 RNU6-191P-201ENST00000516295 94 ntBASIC1.05□□□□□ -2.24
KRT3P12035 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.05□□□□□ -2.24
KRT3P12035 AL356055.1-201ENST00000602528 446 ntBASIC1.05□□□□□ -2.24
KRT3P12035 AC037487.3-201ENST00000606668 112 ntBASIC1.05□□□□□ -2.24
KRT3P12035 Y_RNA.105-201ENST00000363182 111 ntBASIC1.04□□□□□ -2.24
KRT3P12035 Y_RNA.152-201ENST00000363578 100 ntBASIC1.04□□□□□ -2.24
KRT3P12035 Y_RNA.158-201ENST00000363651 101 ntBASIC1.04□□□□□ -2.24
KRT3P12035 RNU6-770P-201ENST00000363929 105 ntBASIC1.04□□□□□ -2.24
KRT3P12035 RNU6-801P-201ENST00000364087 105 ntBASIC1.04□□□□□ -2.24
KRT3P12035 Y_RNA.380-201ENST00000365663 111 ntBASIC1.04□□□□□ -2.24
KRT3P12035 SNORA72.4-201ENST00000384174 132 ntBASIC1.04□□□□□ -2.24
KRT3P12035 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
KRT3P12035 SNORD115-46-201ENST00000390982 71 ntBASIC1.04□□□□□ -2.24
KRT3P12035 SNORA26.5-201ENST00000391215 123 ntBASIC1.04□□□□□ -2.24
KRT3P12035 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.04□□□□□ -2.24
KRT3P12035 ELOCP20-201ENST00000422460 345 ntBASIC1.04□□□□□ -2.24
KRT3P12035 AC245047.7-201ENST00000440265 293 ntBASIC1.04□□□□□ -2.24
KRT3P12035 HMGN2P32-201ENST00000444648 269 ntBASIC1.04□□□□□ -2.24
KRT3P12035 HSPE1P25-201ENST00000455484 251 ntBASIC1.04□□□□□ -2.24
KRT3P12035 COX6CP14-201ENST00000469580 174 ntBASIC1.04□□□□□ -2.24
KRT3P12035 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.04□□□□□ -2.24
KRT3P12035 RNU6-496P-201ENST00000516145 99 ntBASIC1.04□□□□□ -2.24
KRT3P12035 RNU6-1153P-201ENST00000516760 105 ntBASIC1.04□□□□□ -2.24
KRT3P12035 AC090142.3-201ENST00000519012 385 ntBASIC1.04□□□□□ -2.24
KRT3P12035 AL096861.1-201ENST00000610899 123 ntBASIC1.04□□□□□ -2.24
KRT3P12035 SNORA25.1-201ENST00000362326 128 ntBASIC1.03□□□□□ -2.24
KRT3P12035 SNORA25.3-201ENST00000363205 127 ntBASIC1.03□□□□□ -2.24
KRT3P12035 RNU6-1205P-201ENST00000363625 106 ntBASIC1.03□□□□□ -2.24
KRT3P12035 RNU6-806P-201ENST00000365147 105 ntBASIC1.03□□□□□ -2.24
KRT3P12035 Y_RNA.330-201ENST00000365230 109 ntBASIC1.03□□□□□ -2.24
KRT3P12035 Y_RNA.338-201ENST00000365320 114 ntBASIC1.03□□□□□ -2.24
KRT3P12035 SNORD38C-201ENST00000384381 69 ntBASIC1.03□□□□□ -2.24
KRT3P12035 MIR215-201ENST00000384858 110 ntBASIC1.03□□□□□ -2.24
KRT3P12035 SNORA53-201ENST00000391141 249 ntBASIC1.03□□□□□ -2.24
KRT3P12035 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
KRT3P12035 TRMT112P2-201ENST00000512910 132 ntBASIC1.03□□□□□ -2.24
KRT3P12035 RNU6-764P-201ENST00000516396 105 ntBASIC1.03□□□□□ -2.24
KRT3P12035 Y_RNA.701-201ENST00000516812 110 ntBASIC1.03□□□□□ -2.24
KRT3P12035 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.03□□□□□ -2.24
KRT3P12035 MIR2681-201ENST00000581814 105 ntBASIC1.03□□□□□ -2.24
KRT3P12035 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
KRT3P12035 AC007742.2-201ENST00000618226 398 ntBASIC1.03□□□□□ -2.24
KRT3P12035 AC012676.2-201ENST00000619258 186 ntBASIC1.03□□□□□ -2.24
KRT3P12035 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.02□□□□□ -2.25
KRT3P12035 Y_RNA.64-201ENST00000362845 102 ntBASIC1.02□□□□□ -2.25
KRT3P12035 RNU6-899P-201ENST00000363947 107 ntBASIC1.02□□□□□ -2.25
KRT3P12035 Y_RNA.214-201ENST00000364201 112 ntBASIC1.02□□□□□ -2.25
KRT3P12035 Y_RNA.293-201ENST00000364908 93 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC117470.1-201ENST00000381974 330 ntBASIC1.02□□□□□ -2.25
KRT3P12035 RNU6-763P-201ENST00000390865 106 ntBASIC1.02□□□□□ -2.25
KRT3P12035 RNU6-121P-201ENST00000410525 99 ntBASIC1.02□□□□□ -2.25
KRT3P12035 RPL21P38-201ENST00000418090 167 ntBASIC1.02□□□□□ -2.25
KRT3P12035 MTCO1P5-201ENST00000433573 344 ntBASIC1.02□□□□□ -2.25
KRT3P12035 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
KRT3P12035 AC020661.2-201ENST00000560114 134 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC113195.1-201ENST00000579952 141 ntBASIC1.02□□□□□ -2.25
KRT3P12035 MIR4680-201ENST00000580906 66 ntBASIC1.02□□□□□ -2.25
KRT3P12035 MIR3192-201ENST00000584920 77 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC005357.1-201ENST00000588399 301 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC044792.1-201ENST00000593294 196 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC027335.2-201ENST00000624030 375 ntBASIC1.02□□□□□ -2.25
KRT3P12035 AC008163.1-202ENST00000636004 2889 ntBASIC1.02□□□□□ -2.25
KRT3P12035 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
KRT3P12035 Y_RNA.796-201ENST00000364268 102 ntBASIC1.01□□□□□ -2.25
KRT3P12035 Y_RNA.799-201ENST00000364992 102 ntBASIC1.01□□□□□ -2.25
KRT3P12035 RNU6-442P-201ENST00000383968 104 ntBASIC1.01□□□□□ -2.25
KRT3P12035 RNU6-1054P-201ENST00000411293 104 ntBASIC1.01□□□□□ -2.25
KRT3P12035 AC023449.1-201ENST00000454464 154 ntBASIC1.01□□□□□ -2.25
KRT3P12035 UBL5P1-201ENST00000507979 193 ntBASIC1.01□□□□□ -2.25
KRT3P12035 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.01□□□□□ -2.25
KRT3P12035 SCARNA24.2-201ENST00000516968 130 ntBASIC1.01□□□□□ -2.25
KRT3P12035 SNORA74.3-201ENST00000517108 154 ntBASIC1.01□□□□□ -2.25
KRT3P12035 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.01□□□□□ -2.25
KRT3P12035 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
KRT3P12035 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 236.1 ms